| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma10g40293.1 |
| Family | GH10 |
| Protein Properties | Length: 506 Molecular Weight: 55960.9 Isoelectric Point: 5.867 |
| Chromosome | Chromosome/Scaffold: 10 Start: 47752007 End: 47756352 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 267 | 485 | 1e-39 |
| LQDASIERLNFPFGCGTNHHILTNKDCQSWFVDSNTTQREGFKFTTFTNEMKWYSTEKKQGEENYTIADAMLKFTKENDISVRGHNIFWDNPKLQPEWKL GEAAAERMKSVVSRYKGELIAWDVMNENLHFHFYEDKFGENASAAAYATAYELDQEPKLLLNEFNTIEYSGDEASSPAKYIKKLQEILSFPGVSEMSAAI GLQGHFASGQPNLAYMRSA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 506 Download |
| MTFFVAIVTI VITTIVFITG TTTNSTTVII TIIIIVVTDI ATTIIIVTSI ATTFTTISVT 60 ITVIVIIIIT ITATITTVNI VATTITITPT PPTITADIVT TTTINVTDTV ITNRQTYLCC 120 HCLENKQCLA EPERAQYGGG IIVNPGFDHN IEGWTVFGKG AIKEPMSKEG NRFIVANNRT 180 QPLDSFSQKV SEGSDTVSVM FKTNGSEMVR GGQVIAKHGC WTLLKGGIVA TFSSPVEILF 240 KSKNSTVEIW ADNISLQPFS KKQWRSLQDA SIERLNFPFG CGTNHHILTN KDCQSWFVDS 300 NTTQREGFKF TTFTNEMKWY STEKKQGEEN YTIADAMLKF TKENDISVRG HNIFWDNPKL 360 QPEWKLGEAA AERMKSVVSR YKGELIAWDV MNENLHFHFY EDKFGENASA AAYATAYELD 420 QEPKLLLNEF NTIEYSGDEA SSPAKYIKKL QEILSFPGVS EMSAAIGLQG HFASGQPNLA 480 YMRSASVDPQ PSQVFPQLQK NIPVI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 6.0e-24 | 315 | 485 | 189 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-31 | 276 | 485 | 226 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 9.0e-41 | 317 | 485 | 187 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 127 | 494 | 39 | 467 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 126 | 484 | 32 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 127 | 484 | 4 | 406 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 128 | 496 | 8 | 420 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 124 | 485 | 19 | 425 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 0.000000000000004 | 308 | 480 | 40 | 226 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1ta3_B | 0.00000000000001 | 308 | 474 | 39 | 211 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1k6a_A | 0.00000000000002 | 308 | 476 | 40 | 214 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 2bnj_A | 0.00000000000002 | 279 | 476 | 18 | 214 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1gor_A | 0.00000000000002 | 308 | 476 | 40 | 214 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
