Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma10g40300.1 |
Family | GH10 |
Protein Properties | Length: 602 Molecular Weight: 67106.3 Isoelectric Point: 7.4952 |
Chromosome | Chromosome/Scaffold: 10 Start: 47757510 End: 47761447 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 253 | 510 | 0 |
NFPFGCGMNHHILTNKDYQSWFVSRFKFTTFTNEMKWYSTEKKQGEENYTIADAMLKFTKENGISVRGHNIFWDNPKLQPEWVKNLSPEKLGEAAAERMK SVVSRYKGELIAWDVMNENLHFHFYEDKFGENASAAAYATAYELDQEPKLFLNEFNTIEYSGDEASSPAKYIKKLQEILSFPGVSGMSAAIGLQGHFASG QPNLAYMRSGLDLLATTGLPIWLTEASVDPQPSQAEYLEEILREAYSHPAVEGIIMFS |
Full Sequence |
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Protein Sequence Length: 602 Download |
MKVAAEGCNL LLLFITSYLS LISGLGVHSL SYDHSATTKF LSAVNTQTYW CCHCFENNQC 60 LAEPRRAQYG GGIIVNPGFD HNIEGWTVFG KGAIKERISN GGNRFIVAHN RTHPLDSFSQ 120 KVQLKKGMLY TFSAWLQVSE GSDTVSVMFK TKGSKMVRGG QVIAKHGCWT LLKGGIAANF 180 SSPVEILFES KNSNAEIWAD NISLQPFNKK QWRSLQDASI ERVRKRKVRF QISHVNETAL 240 IGAKVITRPI KLNFPFGCGM NHHILTNKDY QSWFVSRFKF TTFTNEMKWY STEKKQGEEN 300 YTIADAMLKF TKENGISVRG HNIFWDNPKL QPEWVKNLSP EKLGEAAAER MKSVVSRYKG 360 ELIAWDVMNE NLHFHFYEDK FGENASAAAY ATAYELDQEP KLFLNEFNTI EYSGDEASSP 420 AKYIKKLQEI LSFPGVSGMS AAIGLQGHFA SGQPNLAYMR SGLDLLATTG LPIWLTEASV 480 DPQPSQAEYL EEILREAYSH PAVEGIIMFS GPAQAGFNAT TLADETFKNT PAGDVVDKLI 540 QEWGTGPNIA TADNRGIVDI SLHHGDYDVT VTHPLIHSPI TLNLCVKKDF SLETIHVKMR 600 A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 6.0e-5 | 71 | 147 | 82 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 9.0e-32 | 285 | 499 | 229 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-47 | 250 | 536 | 310 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 5.0e-68 | 287 | 536 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 601 | 1 | 581 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 27 | 601 | 20 | 575 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 57 | 588 | 2 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 60 | 589 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 56 | 599 | 19 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xas_A | 2e-21 | 256 | 485 | 16 | 244 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1i1x_A | 3e-21 | 256 | 542 | 18 | 303 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1i1w_A | 3e-21 | 256 | 542 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0n_A | 3e-21 | 256 | 485 | 16 | 244 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1v0m_A | 3e-21 | 256 | 485 | 16 | 244 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |