Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma10g40300.2 |
Family | GH10 |
Protein Properties | Length: 582 Molecular Weight: 64715.6 Isoelectric Point: 7.7576 |
Chromosome | Chromosome/Scaffold: 10 Start: 47757499 End: 47761569 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 233 | 490 | 0 |
NFPFGCGMNHHILTNKDYQSWFVSRFKFTTFTNEMKWYSTEKKQGEENYTIADAMLKFTKENGISVRGHNIFWDNPKLQPEWVKNLSPEKLGEAAAERMK SVVSRYKGELIAWDVMNENLHFHFYEDKFGENASAAAYATAYELDQEPKLFLNEFNTIEYSGDEASSPAKYIKKLQEILSFPGVSGMSAAIGLQGHFASG QPNLAYMRSGLDLLATTGLPIWLTEASVDPQPSQAEYLEEILREAYSHPAVEGIIMFS |
Full Sequence |
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Protein Sequence Length: 582 Download |
MKVAAEGCNL LLLFITSYLS LISGLGVHSL SYDHSATTKC LAEPRRAQYG GGIIVNPGFD 60 HNIEGWTVFG KGAIKERISN GGNRFIVAHN RTHPLDSFSQ KVQLKKGMLY TFSAWLQVSE 120 GSDTVSVMFK TKGSKMVRGG QVIAKHGCWT LLKGGIAANF SSPVEILFES KNSNAEIWAD 180 NISLQPFNKK QWRSLQDASI ERVRKRKVRF QISHVNETAL IGAKVITRPI KLNFPFGCGM 240 NHHILTNKDY QSWFVSRFKF TTFTNEMKWY STEKKQGEEN YTIADAMLKF TKENGISVRG 300 HNIFWDNPKL QPEWVKNLSP EKLGEAAAER MKSVVSRYKG ELIAWDVMNE NLHFHFYEDK 360 FGENASAAAY ATAYELDQEP KLFLNEFNTI EYSGDEASSP AKYIKKLQEI LSFPGVSGMS 420 AAIGLQGHFA SGQPNLAYMR SGLDLLATTG LPIWLTEASV DPQPSQAEYL EEILREAYSH 480 PAVEGIIMFS GPAQAGFNAT TLADETFKNT PAGDVVDKLI QEWGTGPNIA TADNRGIVDI 540 SLHHGDYDVT VTHPLIHSPI TLNLCVKKDF SLETIHVKMR A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 6.0e-5 | 51 | 127 | 82 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 1.0e-31 | 265 | 479 | 229 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-47 | 230 | 516 | 310 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-68 | 267 | 516 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 581 | 1 | 581 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 27 | 581 | 20 | 575 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 37 | 568 | 2 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 40 | 569 | 8 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 39 | 579 | 22 | 562 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1i1x_A | 2e-21 | 236 | 522 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 2e-21 | 236 | 522 | 18 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1xas_A | 2e-21 | 236 | 465 | 16 | 244 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1e0v_A | 3e-21 | 236 | 465 | 16 | 244 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1v0n_A | 3e-21 | 236 | 465 | 16 | 244 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |