| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma11g03560.1 |
| Family | CE8 |
| Protein Properties | Length: 359 Molecular Weight: 39553.6 Isoelectric Point: 8.7326 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2379026 End: 2382456 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 57 | 348 | 0 |
| ITVDVNGGGHYRSVQDAVNAVPDNNRKNVLVQINAGCYKEKVVVPVTKPYITFQGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFATYFSARNIS FKNTAPAPMPGMQGRQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAHDRKEAEEKTGFA FVGCKVTGTGPLYVGRAMGQYSRIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSWARDLNFESAHPFIRKSFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 359 Download |
| MASSSLLVSL QVALVVFTCI FHAATVTCDR SFKIFSSMNN SSKSSHHWIG PIGHRKITVD 60 VNGGGHYRSV QDAVNAVPDN NRKNVLVQIN AGCYKEKVVV PVTKPYITFQ GAGKEVTVIE 120 WHDRASDPGP SGQQLRTYRT ASVTVFATYF SARNISFKNT APAPMPGMQG RQAVAFRISG 180 DKAYFSGCGF YGAQDTLCDD AGRHYFKECY IEGSIDFIFG NGRSMYKDCE LHSIATRFGS 240 IAAHDRKEAE EKTGFAFVGC KVTGTGPLYV GRAMGQYSRI VYSYTYFDDI VAHGGWDDWD 300 HADNKNKTVF FGVYKCWGPG AEAVRGVSWA RDLNFESAHP FIRKSFVNGR HWIAPSDA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 3.0e-105 | 55 | 355 | 303 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 3.0e-106 | 57 | 358 | 312 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-115 | 53 | 353 | 303 | + pectinesterase | ||
| PLN02682 | PLN02682 | 3.0e-137 | 55 | 355 | 302 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 0 | 46 | 358 | 313 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD64977.1 | 0 | 7 | 358 | 13 | 360 | pectinesterase family protein [Brassica oleracea] |
| EMBL | CBI31927.1 | 0 | 1 | 358 | 1 | 349 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199561.1 | 0 | 3 | 358 | 5 | 362 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002266321.1 | 0 | 40 | 358 | 38 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 42 | 355 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1.99993e-41 | 49 | 353 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-33 | 62 | 353 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-17 | 64 | 263 | 41 | 239 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 8e-17 | 64 | 233 | 15 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 8e-17 | 64 | 233 | 15 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
