| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma12g05310.1 |
| Family | GH19 |
| Protein Properties | Length: 281 Molecular Weight: 30569.1 Isoelectric Point: 4.7338 |
| Chromosome | Chromosome/Scaffold: 12 Start: 3527682 End: 3529718 |
| Description | homolog of carrot EP3-3 chitinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 79 | 280 | 0 |
| VADIVTSEFFNAIIDQAEDHCAGKNFYSRDAFLDALIAYDQFAKTGSVDDSKREIAAAFAHFTYQSRHFCYIEEIEGASKDYCDKTNRHYPCAHNKGYYG RGPIQLSWNFNYGPAGENNGFDGLNAPETVASDPVISFKTALWYWTQNVSPVMKHGFGATIRAINGHLECDGANPETVQARVNYYTEYCSQLDVAPGDNL TC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 281 Download |
| MMMMGNNVHS IGVIGVMVSG LVLMMVSKGV SVRAQNCGCE AELCCSKYGY CGSGDDYCGK 60 GCKEGPCYGT ATPNDDVSVA DIVTSEFFNA IIDQAEDHCA GKNFYSRDAF LDALIAYDQF 120 AKTGSVDDSK REIAAAFAHF TYQSRHFCYI EEIEGASKDY CDKTNRHYPC AHNKGYYGRG 180 PIQLSWNFNY GPAGENNGFD GLNAPETVAS DPVISFKTAL WYWTQNVSPV MKHGFGATIR 240 AINGHLECDG ANPETVQARV NYYTEYCSQL DVAPGDNLTC * 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00442 | lysozyme_like | 4.0e-7 | 163 | 232 | 70 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| pfam00182 | Glyco_hydro_19 | 2.0e-86 | 82 | 280 | 232 | + Chitinase class I. | ||
| cd00325 | chitinase_glyco_hydro_19 | 6.0e-95 | 83 | 280 | 230 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0008061 | chitin binding |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR87869.1 | 0 | 1 | 280 | 1 | 282 | class IV chitinase precursor [Medicago truncatula] |
| GenBank | ACL36992.1 | 0 | 1 | 280 | 1 | 282 | class IV chitinase [Medicago sativa] |
| GenBank | ACM45716.1 | 0 | 21 | 280 | 8 | 272 | class IV chitinase [Pyrus pyrifolia] |
| GenBank | ACU17801.1 | 0 | 1 | 280 | 1 | 280 | unknown [Glycine max] |
| GenBank | ACU23323.1 | 0 | 16 | 280 | 9 | 274 | unknown [Glycine max] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hbh_A | 0 | 78 | 280 | 1 | 204 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 3hbe_X | 0 | 78 | 280 | 1 | 204 | A Chain A, Ascorbate Peroxidase R38k Mutant |
| PDB | 3hbd_A | 0 | 78 | 280 | 1 | 204 | A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a |
| PDB | 1wvv_B | 1.4013e-45 | 104 | 280 | 79 | 265 | A Chain A, Crystal Structure Of Chitinase C Mutant E147q |
| PDB | 1wvv_A | 1.4013e-45 | 104 | 280 | 79 | 265 | A Chain A, Crystal Structure Of Chitinase C Mutant E147q |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
