y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma12g12626.1 |
Family | GT14 |
Protein Properties | Length: 245 Molecular Weight: 27662 Isoelectric Point: 9.4997 |
Chromosome | Chromosome/Scaffold: 12 Start: 10844862 End: 10845830 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 61 | 241 | 0 |
LSYLVSGSKGDGAAVTRVLLALYHPNNRYVVHLDLESSPEERSDLVRFVEGHALFKRFGNVRVIKKANLVTYRGPTMVANMLHAAAILLRELGDWDWFIN LSASDYPLVTQDDLLHTFSYLPRDLNFSDHTSDIGWKDHQRARPIIVDPGLYMNKKQDVFWITQRRSRPTTFKLFTGEDPF |
Full Sequence |
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Protein Sequence Length: 245 Download |
MTLLLGLRKI CSLFLATLTS PEGTPILPFY RSITAASYSV FVESKLRPLP VVSSLPPPPR 60 LSYLVSGSKG DGAAVTRVLL ALYHPNNRYV VHLDLESSPE ERSDLVRFVE GHALFKRFGN 120 VRVIKKANLV TYRGPTMVAN MLHAAAILLR ELGDWDWFIN LSASDYPLVT QDDLLHTFSY 180 LPRDLNFSDH TSDIGWKDHQ RARPIIVDPG LYMNKKQDVF WITQRRSRPT TFKLFTGEDP 240 FLVC* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 7.0e-43 | 67 | 237 | 171 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-91 | 67 | 237 | 171 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24335.1 | 0 | 25 | 237 | 55 | 272 | unknown [Picea sitchensis] |
RefSeq | XP_002282083.1 | 0 | 19 | 237 | 42 | 258 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305329.1 | 0 | 19 | 237 | 42 | 258 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324028.1 | 0 | 42 | 237 | 64 | 258 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517446.1 | 0 | 22 | 237 | 47 | 260 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000008 | 77 | 211 | 101 | 229 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000008 | 77 | 211 | 101 | 229 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000008 | 77 | 211 | 101 | 229 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000008 | 77 | 211 | 101 | 229 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00002 | 77 | 211 | 101 | 229 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |