y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma12g15940.1 |
Family | AA3 |
Protein Properties | Length: 752 Molecular Weight: 82252.2 Isoelectric Point: 7.0633 |
Chromosome | Chromosome/Scaffold: 12 Start: 14940072 End: 14945076 |
Description | fatty alcohol oxidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 226 | 749 | 1.12104e-44 |
GLNVTLDSKSNILKVKCDALVVGSGCGGGVAAAVLSSAGYKVVVLEKGNYFSTQDYSSLEGPSMNQLYETGGILASVDSRVLVLAGSTVGGGSAVNWSAC IKTPHKVLNEWSENHKLPFFSSQEYLSAMETVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAV ERDAVIITGCKAERFLLESNRSGNGRKKKCLGVMAKALNSRVTMKLQIEAKVTISAGGALLTPPLLISSGLKNKNIGKNLHLHPVLMTWGYFPESNDSEF KGKVYEGGIITSVHKVPSTDSNSDSRAIIETPSLGPASFAALCPWESGLDFKERMLNYPRTSHLITIIRDMACGQVSTEGRISYKLNEIDKENMKAGLKQ ALKILIAAGAVEVGTHRSDGQRLKCDGIGENEVQEFLDSVCPMEGALSPGEYWNIYSSAHQMGSCRMGVNEKEGAVDENGETWEAEGLFVCDASVLPSAV GVNPMITVQSTAYCISNRIADYLR |
Full Sequence |
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Protein Sequence Length: 752 Download |
MTRKECHPLL RGGRGDSKYK HGFSAAEMES LASICEVVLP PLPMDALKIR KEDQIDDYDS 60 SKSLKSFWDI SASRYPIPHE VAEMLTKRSL IEAVILIRVV LWLLATRLGT LLLCGFLCLG 120 EKWPYVNNFS NISLEKREMV MQKWLKHRFL TPIRLAFAYI KVLCLFVFFS WVDENGDNPA 180 WKAIGYEVPA DENLTNASKT RPLEKGIIET MNESDSALQQ SLANKGLNVT LDSKSNILKV 240 KCDALVVGSG CGGGVAAAVL SSAGYKVVVL EKGNYFSTQD YSSLEGPSMN QLYETGGILA 300 SVDSRVLVLA GSTVGGGSAV NWSACIKTPH KVLNEWSENH KLPFFSSQEY LSAMETVCER 360 IGVTENCTQE GFQNQVLRKG CQNLGLKVDY VPRNSSGNHY CGSCGYGCPK GEKQGTQATW 420 LVDAVERDAV IITGCKAERF LLESNRSGNG RKKKCLGVMA KALNSRVTMK LQIEAKVTIS 480 AGGALLTPPL LISSGLKNKN IGKNLHLHPV LMTWGYFPES NDSEFKGKVY EGGIITSVHK 540 VPSTDSNSDS RAIIETPSLG PASFAALCPW ESGLDFKERM LNYPRTSHLI TIIRDMACGQ 600 VSTEGRISYK LNEIDKENMK AGLKQALKIL IAAGAVEVGT HRSDGQRLKC DGIGENEVQE 660 FLDSVCPMEG ALSPGEYWNI YSSAHQMGSC RMGVNEKEGA VDENGETWEA EGLFVCDASV 720 LPSAVGVNPM ITVQSTAYCI SNRIADYLRR D* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 0.003 | 682 | 749 | 69 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 0.0002 | 682 | 749 | 69 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 1.0e-21 | 606 | 740 | 141 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 9.0e-24 | 265 | 751 | 544 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam00732 | GMC_oxred_N | 7.0e-91 | 289 | 510 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0016491 | oxidoreductase activity |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN71289.1 | 0 | 3 | 750 | 2 | 737 | hypothetical protein [Vitis vinifera] |
EMBL | CAP15762.1 | 0 | 3 | 751 | 2 | 747 | long chain fatty alcohol oxidase FAO1 [Lotus japonicus] |
RefSeq | XP_002285334.1 | 0 | 3 | 750 | 2 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311685.1 | 0 | 3 | 751 | 2 | 744 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314488.1 | 0 | 28 | 751 | 1 | 716 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1naa_B | 0.000002 | 243 | 744 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1naa_A | 0.000002 | 243 | 744 | 4 | 534 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
PDB | 1kdg_B | 0.000003 | 243 | 744 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 1kdg_A | 0.000003 | 243 | 744 | 9 | 539 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
PDB | 2jbv_B | 0.00003 | 361 | 749 | 168 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |