| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma12g25740.1 |
| Family | GH18 |
| Protein Properties | Length: 299 Molecular Weight: 31508.4 Isoelectric Point: 5.6205 |
| Chromosome | Chromosome/Scaffold: 12 Start: 28913814 End: 28914991 |
| Description | chitinase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 30 | 249 | 4.1e-28 |
| IAIYWGQNGNEGSLADACNTGNYQFVNIAFLSTFGNGQTPQLNLAGHCEPSTNGCTKFSDEIKACQGKGIKVLLSLGGASGSYSLGSAEEATQLATFLWN NFLGGQSSSRPLGDAVLDGIDFDIEAGGGNHWDELARALNGFSSQKKVYLAAAPQCPIPDAHLDSAIKTGLFDYVWVQFYNNPPCQYSSGSTNNLINSWN QWTSSQAKQVFLGLPASTAA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 299 Download |
| MASLKQVSPL LLLFPLLLIS LFKSSHAAGI AIYWGQNGNE GSLADACNTG NYQFVNIAFL 60 STFGNGQTPQ LNLAGHCEPS TNGCTKFSDE IKACQGKGIK VLLSLGGASG SYSLGSAEEA 120 TQLATFLWNN FLGGQSSSRP LGDAVLDGID FDIEAGGGNH WDELARALNG FSSQKKVYLA 180 AAPQCPIPDA HLDSAIKTGL FDYVWVQFYN NPPCQYSSGS TNNLINSWNQ WTSSQAKQVF 240 LGLPASTAAA GSGFVPADVL TSQVLPAIKG SAKYGGVMLW DRFNDGQNKY SDAIKGSV* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06545 | GH18_3CO4_chitinase | 0.003 | 146 | 292 | 166 | + The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas. | ||
| COG3469 | COG3469 | 0.002 | 36 | 289 | 288 | + Chitinase [Carbohydrate transport and metabolism] | ||
| cd02871 | GH18_chitinase_D-like | 3.0e-5 | 33 | 297 | 322 | + GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. | ||
| pfam00704 | Glyco_hydro_18 | 4.0e-26 | 30 | 249 | 241 | + Glycosyl hydrolases family 18. | ||
| cd02877 | GH18_hevamine_XipI_class_III | 1.0e-124 | 28 | 296 | 280 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA01948.1 | 0 | 1 | 298 | 1 | 294 | acidic chitinase [Vigna angularis] |
| DDBJ | BAA08708.1 | 0 | 1 | 298 | 1 | 297 | chitinase [Psophocarpus tetragonolobus] |
| EMBL | CAB43737.2 | 0 | 1 | 298 | 1 | 298 | chitinase [Trifolium repens] |
| Swiss-Prot | P29024 | 0 | 1 | 298 | 5 | 298 | CHIA_PHAAN RecName: Full=Acidic endochitinase; Flags: Precursor |
| Swiss-Prot | P36908 | 0 | 26 | 298 | 22 | 293 | CHIA_CICAR RecName: Full=Acidic endochitinase; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gsj_A | 0 | 29 | 298 | 2 | 271 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 2hvm_A | 0 | 29 | 298 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1llo_A | 0 | 29 | 298 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1hvq_A | 0 | 29 | 298 | 2 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
| PDB | 1kr0_A | 0 | 29 | 298 | 2 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
