| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma12g30210.2 |
| Family | GT47 |
| Protein Properties | Length: 361 Molecular Weight: 40956.9 Isoelectric Point: 9.3853 |
| Chromosome | Chromosome/Scaffold: 12 Start: 33788496 End: 33791148 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 2 | 298 | 0 |
| KVFVYELPPKYNTDWLANERCSSHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNDFPAIGHARTLISSAVNLVSTEYPFWNRSRGSDH VFVASHDFGACFHTLEDVAMADGIPIILKNSIVLQTFGVIHQHPCQEVENVVIPPYVSPESVRSTLEKFPVTGRRDIFAFFRGKMEVHPKNVSRRFYSKR VRTEIWRKFNGDRRFYLQRHRFAGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIQLPFSSAVRWSEISLSVAERDVGKLGKILERV | |||
| Full Sequence |
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| Protein Sequence Length: 361 Download |
| MKVFVYELPP KYNTDWLANE RCSSHLFASE VAIHRALLTS EVRTFDPYEA DFFFVPVYVS 60 CNFSAVNDFP AIGHARTLIS SAVNLVSTEY PFWNRSRGSD HVFVASHDFG ACFHTLEDVA 120 MADGIPIILK NSIVLQTFGV IHQHPCQEVE NVVIPPYVSP ESVRSTLEKF PVTGRRDIFA 180 FFRGKMEVHP KNVSRRFYSK RVRTEIWRKF NGDRRFYLQR HRFAGYQLEI ARSVFCLCPL 240 GWAPWSPRLV ESVALGCVPV VIADGIQLPF SSAVRWSEIS LSVAERDVGK LGKILERVAA 300 TNLSVIQRNL WDPRTRRALL FNNNKVQEGD ATWQVLVSLS EKLGRSQRRS SVAGQLKSDT 360 * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 8.0e-75 | 1 | 298 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33322.1 | 0 | 1 | 348 | 88 | 435 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
| GenBank | ABI64067.1 | 0 | 1 | 355 | 88 | 442 | glycosyltransferase GT47C [Populus tremula x Populus alba] |
| RefSeq | XP_002275679.1 | 0 | 1 | 343 | 99 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314302.1 | 0 | 1 | 355 | 108 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523710.1 | 0 | 1 | 355 | 107 | 461 | transferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797103 | 361 | 1 | 361 | 0 |
| DY287013 | 324 | 33 | 355 | 0 |
| CK261693 | 317 | 25 | 341 | 0 |
| FC898195 | 280 | 35 | 313 | 0 |
| EG481525 | 271 | 1 | 269 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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