Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma12g33610.1 |
Family | CBM43 |
Protein Properties | Length: 176 Molecular Weight: 18899.4 Isoelectric Point: 4.813 |
Chromosome | Chromosome/Scaffold: 12 Start: 36827635 End: 36829018 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 33 | 116 | 3.4e-30 |
WCVAKNNAEDTALQSAVEWACGAGGADCGAIQGGGPCFDPSSMQNTASYAFNDYFRKHAISEENCNFGNNAAITSFNPSFGNCK |
Full Sequence |
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Protein Sequence Length: 176 Download |
MSKREEFAPW HFFFLLLLLW GFVGGDAPGR EVWCVAKNNA EDTALQSAVE WACGAGGADC 60 GAIQGGGPCF DPSSMQNTAS YAFNDYFRKH AISEENCNFG NNAAITSFNP SFGNCKLPSS 120 LLVNNGSFSG SVSSMGLMPG EETSGCGGVV WRWWLAPFIV TTHFLFMLVS ISRIV* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-6 | 33 | 103 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-20 | 33 | 116 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 9.99967e-42 | 14 | 159 | 63 | 205 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 8.00001e-42 | 14 | 159 | 98 | 241 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 3.00018e-42 | 14 | 167 | 22 | 173 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 31 | 171 | 34 | 173 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 9.99995e-41 | 25 | 139 | 29 | 142 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-16 | 33 | 119 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |