y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma12g36280.1 |
Family | GT20 |
Protein Properties | Length: 916 Molecular Weight: 103626 Isoelectric Point: 6.8932 |
Chromosome | Chromosome/Scaffold: 12 Start: 39389570 End: 39401605 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 99 | 566 | 0 |
RQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHY LGLPQEDRLATTRSFQSQFEAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNHKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVG FHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKDHIKKLQERFNGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN PGWHDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAITDVALVTSLRDGMNLVSYEFVACQDKKKGVLIL SEFAGAAQSLGAGAILVNPWNITEVATAISKALNMPSAEREKRHKHNYEHVKTHTAQEWAETFVSELN |
Full Sequence |
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Protein Sequence Length: 916 Download |
MVGFQSDHMP GNKCNGNSNS FPVPDRHERL MRGRELRKSS RASPDSNSIS NVGSEIFEHD 60 LRLREDNNSA APIVERYLEE VAAAAAAARG ERKDGRPFRQ RLLVVANRLP VSAIRKGEDS 120 WSLEISAGGL VSALLGVKEF EARWIGWAGV NVPDEIGQKA LTKALAEKRC IPVFLDEEIV 180 HQYYNGYCNN ILWPLFHYLG LPQEDRLATT RSFQSQFEAY QKANQMFADV VNKHYEEGDV 240 VWCHDYHLMF LPQCLKNYNH KMKVGWFLHT PFPSSEIHRT LPSRSELLHA VLAADLVGFH 300 TYDYARHFVS ACTRILGLEG TPEGVENQGK LTRVAAFPIG IDSERFIRAL DLPQVKDHIK 360 KLQERFNGRK VMLGVDRLDM IKGIPQKILA FEKFLEENPG WHDKVVLLQI AVPTRTDVPE 420 YQKLTSQVHE IVGRINGRFG TLTAVPIHHL DRSLDFHALC ALYAITDVAL VTSLRDGMNL 480 VSYEFVACQD KKKGVLILSE FAGAAQSLGA GAILVNPWNI TEVATAISKA LNMPSAEREK 540 RHKHNYEHVK THTAQEWAET FVSELNDTVV EAQIRTNQVP PRLPTETAVE CYLQSNNRLL 600 ILGFNGTLTE PIEREGDRFK ERELTVHPEL KQPLAELCSD PKTTVVVLSG SCRTVLDENF 660 KEYDIWLAAE NGMFLNPSKG EWMTTMPEQL NMEWVDSVKH VFDYFTDRTP RSYFEEREAS 720 LVWSYRHADV EFGRLQARDM LQHLWTGPIS NASVEVVQGS RSVEVRAANV TKGAAIDRIL 780 GEIVHSKSMT TPIDYVLCIG HFLTKQDEDI YAFFEPELPR SKVTEGVKFP VERVSSSQNK 840 GQRPVSNSEK KTNNHVCRLP RRPAPEKISW NVLDLKKENY FSCAVGRTQT NARYTLASPD 900 EVVAFLKELH TLSQS* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 0 | 9 | 909 | 928 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 94 | 911 | 818 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
TIGR02400 | trehalose_OtsA | 0 | 101 | 567 | 469 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
PRK14501 | PRK14501 | 0 | 101 | 824 | 732 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO61742.1 | 0 | 9 | 909 | 1 | 916 | trehalose-phosphate synthase 1 [Solanum lycopersicum] |
RefSeq | NP_177979.1 | 0 | 9 | 915 | 1 | 941 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002285632.1 | 0 | 9 | 909 | 1 | 920 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331300.1 | 0 | 9 | 913 | 1 | 921 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531237.1 | 0 | 9 | 913 | 1 | 923 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 0 | 101 | 569 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 0 | 101 | 569 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 0 | 101 | 569 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 0 | 101 | 569 | 2 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 0 | 101 | 569 | 3 | 455 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX546763 | 301 | 91 | 390 | 0 |
CV711307 | 293 | 99 | 391 | 0 |
DW069910 | 288 | 187 | 474 | 0 |
GO265628 | 300 | 456 | 755 | 0 |
ES813375 | 361 | 462 | 819 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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