y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma12g36280.4 |
Family | GT20 |
Protein Properties | Length: 544 Molecular Weight: 61389.9 Isoelectric Point: 6.373 |
Chromosome | Chromosome/Scaffold: 12 Start: 39393895 End: 39401668 |
Description | trehalose-6-phosphate synthase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 1 | 195 | 0 |
MLGVDRLDMIKGIPQKILAFEKFLEENPGWHDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAITDVALV TSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVATAISKALNMPSAEREKRHKHNYEHVKTHTAQEWAETFVSELN |
Full Sequence |
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Protein Sequence Length: 544 Download |
MLGVDRLDMI KGIPQKILAF EKFLEENPGW HDKVVLLQIA VPTRTDVPEY QKLTSQVHEI 60 VGRINGRFGT LTAVPIHHLD RSLDFHALCA LYAITDVALV TSLRDGMNLV SYEFVACQDK 120 KKGVLILSEF AGAAQSLGAG AILVNPWNIT EVATAISKAL NMPSAEREKR HKHNYEHVKT 180 HTAQEWAETF VSELNDTVVE AQIRTNQVPP RLPTETAVEC YLQSNNRLLI LGFNGTLTEP 240 IEREGDRFKE RELTVHPELK QPLAELCSDP KTTVVVLSGS CRTVLDENFK EYDIWLAAEN 300 GMFLNPSKGE WMTTMPEQLN MEWVDSVKHV FDYFTDRTPR SYFEEREASL VWSYRHADVE 360 FGRLQARDML QHLWTGPISN ASVEVVQGSR SVEVRAANVT KGAAIDRILG EIVHSKSMTT 420 PIDYVLCIGH FLTKDEDIYA FFEPELPRSK VTEGVKFPVE RVSSSQNKGQ RPVSNSEKKT 480 NNHVCRLPRR PAPEKISWNV LDLKKENYFS CAVGRTQTNA RYTLASPDEV VAFLKELHTL 540 SQS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02400 | trehalose_OtsA | 8.0e-116 | 1 | 196 | 196 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. | ||
PRK14501 | PRK14501 | 2.0e-145 | 2 | 452 | 453 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
PLN03064 | PLN03064 | 0 | 1 | 537 | 561 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PLN03063 | PLN03063 | 0 | 1 | 539 | 539 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABO61742.1 | 0 | 1 | 537 | 363 | 916 | trehalose-phosphate synthase 1 [Solanum lycopersicum] |
RefSeq | NP_177979.1 | 0 | 1 | 543 | 364 | 941 | ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); alpha,alpha-trehalose-phosphate synthase (UDP-forming)/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002285632.1 | 0 | 1 | 537 | 359 | 920 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331300.1 | 0 | 1 | 541 | 359 | 921 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002531237.1 | 0 | 1 | 537 | 362 | 919 | trehalose-6-phosphate synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 9.94922e-44 | 1 | 198 | 257 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 9.94922e-44 | 1 | 198 | 257 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 9.94922e-44 | 1 | 198 | 257 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 9.94922e-44 | 1 | 198 | 257 | 454 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 9.94922e-44 | 1 | 198 | 258 | 455 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO265628 | 300 | 85 | 384 | 0 |
ES813375 | 360 | 91 | 447 | 0 |
CX545499 | 305 | 33 | 334 | 0 |
GE582665 | 283 | 66 | 344 | 0 |
ES848514 | 286 | 13 | 295 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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