Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g02000.1 |
Family | GH5 |
Protein Properties | Length: 507 Molecular Weight: 57014.5 Isoelectric Point: 8.173 |
Chromosome | Chromosome/Scaffold: 13 Start: 1827351 End: 1832253 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 217 | 495 | 5.60519e-43 |
QVMKEHWKTFIVEDDFKFIASNGLNAVRIPIGWWIASDPTPPPPYVGGSLNALDKAFLWAQKYGLKIILDLHAAPGSQNGFEHSSSRDGSQEWGKTDETI QQTVHVIDFLTARYAKCQSLYAVELINEPLSPGVTLEALNKYYKAGYEAVRKHSSTAYVVLSNRIGPSNPRELFPLANGLMRSVIDVHYYNLFQDVFNDM TVQQNIDFIYNNRSSQLSFVTTSNGPLTFVGEWVAEWQVNGATKEDYQRFAKAQLDVYGRATFGWAYWAFKNVNNHWSL |
Full Sequence |
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Protein Sequence Length: 507 Download |
MMTSYVNLKI WLLNFVTLFS ILSLSHGRRA NANFRVRAVN LGGWLVTEGW MKPSLFDGIP 60 NKDFLDGTGL QFKSVTTRKY LCAESGGGTI IVANRTSASG WETFALWRLN EDTFRFRVFN 120 KQFVGLDGIN VVAVSNISTD SLTFHVVKES DNSNRVRIKA SNGYFLQAKT EDLVTADGSE 180 VNGWGDDDPS VFVMTIGKRM QGEYQVTSGY GPTKAHQVMK EHWKTFIVED DFKFIASNGL 240 NAVRIPIGWW IASDPTPPPP YVGGSLNALD KAFLWAQKYG LKIILDLHAA PGSQNGFEHS 300 SSRDGSQEWG KTDETIQQTV HVIDFLTARY AKCQSLYAVE LINEPLSPGV TLEALNKYYK 360 AGYEAVRKHS STAYVVLSNR IGPSNPRELF PLANGLMRSV IDVHYYNLFQ DVFNDMTVQQ 420 NIDFIYNNRS SQLSFVTTSN GPLTFVGEWV AEWQVNGATK EDYQRFAKAQ LDVYGRATFG 480 WAYWAFKNVN NHWSLEWMVK NGYIKL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam06268 | Fascin | 0.007 | 79 | 182 | 107 | + Fascin domain. This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven. Members of this family are histidine rich, typically contain the repeated motif of HHXH. | ||
cd00257 | Fascin | 8.0e-7 | 72 | 184 | 113 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 2.0e-11 | 222 | 488 | 277 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 2.0e-28 | 211 | 503 | 331 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18831.1 | 0 | 2 | 506 | 1 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 18 | 506 | 15 | 505 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001064458.1 | 0 | 20 | 506 | 16 | 508 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002285806.1 | 0 | 2 | 506 | 1 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002513884.1 | 0 | 12 | 506 | 9 | 506 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3n9k_A | 1e-35 | 203 | 502 | 50 | 381 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 2pc8_A | 1e-35 | 203 | 502 | 51 | 382 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 1eqp_A | 1e-35 | 203 | 502 | 45 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |