Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g05441.1 |
Family | GT5 |
Protein Properties | Length: 777 Molecular Weight: 86597.8 Isoelectric Point: 5.7233 |
Chromosome | Chromosome/Scaffold: 13 Start: 5761151 End: 5775850 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 286 | 769 | 0 |
NVILVAAECAPFVKTGGLGDVAGSLPKALARRGHRVMVVVPRYSHYADAQDIGVWKRYKVDGQDMEVTYFHSYIDGVDFVFIDSPNFRHLQDNIYGGNRE DILKRMVLFCKAAAEVPWHVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGLMKYTRSVLVIHNIAHQGRGPIDDFRYTDLPEHYIDLFKLYDPV GGEHFNIFSAGLKAADRIVTVSHGYAWEIKTSEGGWGLHGIINENDWKLRGIVNGIDTKDWNPKIDVHLKSDGYTNYTLETLQSGKRQCKAALQKELGLP VREDVPLLGFIGRLDQQKGIDLIAEAIPWIVGQDVQLVMLGTGRPDLEDMLRQFESQHRDKVRGWVGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAM NYGTIPVVHAVGGLRDTVKPFNPFEESGLGWTFDSAETNKLINALGNCLLTFRQYKQSWEGLQRRGMTQDLSWDNAAQQYEEVL |
Full Sequence |
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Protein Sequence Length: 777 Download |
MASMGSLPFL VEANADSTLM MMMLQNRNHK FSSPKFNTVN ASSLVRGWGR GRVNHRCSSR 60 GLLCLVEKNK HISALGKSSG TSEDKDESEE VLQATIEKSK KVLALQRELL QQISERRKLV 120 SSINSESTPE IEGDSISYEH SDESLSSDSI PQKGSAKRGS AVENENGVLV SSNYVQSIEK 180 EIPDVSFVGI DLGLDKGEEE DDNLSPVEKA SPRLYFDEQL NSKRYETITP DTLTSEIPRS 240 TETSNRKIEI LEALSESSTK EVANEGDNVE SKGENPPPLA GANVMNVILV AAECAPFVKT 300 GGLGDVAGSL PKALARRGHR VMVVVPRYSH YADAQDIGVW KRYKVDGQDM EVTYFHSYID 360 GVDFVFIDSP NFRHLQDNIY GGNREDILKR MVLFCKAAAE VPWHVPCGGV CYGDGNLAFI 420 ANDWHTALLP VYLKAYYRDH GLMKYTRSVL VIHNIAHQGR GPIDDFRYTD LPEHYIDLFK 480 LYDPVGGEHF NIFSAGLKAA DRIVTVSHGY AWEIKTSEGG WGLHGIINEN DWKLRGIVNG 540 IDTKDWNPKI DVHLKSDGYT NYTLETLQSG KRQCKAALQK ELGLPVREDV PLLGFIGRLD 600 QQKGIDLIAE AIPWIVGQDV QLVMLGTGRP DLEDMLRQFE SQHRDKVRGW VGFSVKMAHR 660 ITAGADILLM PSRFEPCGLN QLYAMNYGTI PVVHAVGGLR DTVKPFNPFE ESGLGWTFDS 720 AETNKLINAL GNCLLTFRQY KQSWEGLQRR GMTQDLSWDN AAQQYEEVLV AAKYQW* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 1.0e-95 | 285 | 773 | 515 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 1.0e-144 | 285 | 767 | 494 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
TIGR02095 | glgA | 0 | 285 | 772 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 286 | 769 | 496 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
PRK00654 | glgA | 0 | 285 | 768 | 497 | + glycogen synthase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL98479.1 | 0 | 20 | 776 | 1 | 757 | starch synthase IIa-1 precursor [Glycine max] |
GenBank | ACL98480.1 | 0 | 1 | 776 | 1 | 774 | starch synthase IIa-2 precursor [Glycine max] |
GenBank | ACL98483.1 | 0 | 21 | 776 | 1 | 779 | starch synthase IIa precursor [Vigna unguiculata] |
GenBank | ACL98485.1 | 0 | 20 | 776 | 1 | 742 | starch synthase IIa precursor [Vigna radiata] |
DDBJ | BAD18847.1 | 0 | 20 | 776 | 1 | 738 | starch synthase II-2 precursor [Phaseolus vulgaris] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 285 | 770 | 10 | 509 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3vue_A | 0 | 285 | 770 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 285 | 768 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 285 | 768 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 285 | 768 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777841 | 319 | 459 | 777 | 0 |
HO777841 | 393 | 76 | 466 | 0 |
HO781048 | 392 | 386 | 777 | 0 |
HO445868 | 437 | 341 | 777 | 0 |
HO781048 | 41 | 344 | 384 | 0.00003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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