y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g05650.1 |
Family | CE8 |
Protein Properties | Length: 317 Molecular Weight: 35505.3 Isoelectric Point: 8.0451 |
Chromosome | Chromosome/Scaffold: 13 Start: 5981402 End: 5985168 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 6 | 296 | 0 |
ITVSQDGTGQYRTVQEAIDAVPLGNTRRTVIRVSPGTYRQPLYVAKTKNFITLVGLRPEDTVLTWNNTATSIHHHQDARVIGTGTFGCGTIIVEGGDFIA ENITFENSSPQGAGQAVAVRVTVDRCAFYNCRFLGWQDTLYLHYGIQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRNSPQEKTGYVFLR CVVTGNGGTSYAYLGRPWRPFARVVFAFTYMDQCIKPAGWNNWGKIENEKTACFYEYRCFGPGWCPSQRVKWARELQAEAAEQFLMHSFID |
Full Sequence |
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Protein Sequence Length: 317 Download |
MAALVITVSQ DGTGQYRTVQ EAIDAVPLGN TRRTVIRVSP GTYRQPLYVA KTKNFITLVG 60 LRPEDTVLTW NNTATSIHHH QDARVIGTGT FGCGTIIVEG GDFIAENITF ENSSPQGAGQ 120 AVAVRVTVDR CAFYNCRFLG WQDTLYLHYG IQYLKDCYIE GSVDFIFGNS TALLEHCHIH 180 CKSAGFITAQ SRNSPQEKTG YVFLRCVVTG NGGTSYAYLG RPWRPFARVV FAFTYMDQCI 240 KPAGWNNWGK IENEKTACFY EYRCFGPGWC PSQRVKWARE LQAEAAEQFL MHSFIDPESE 300 RPWLAQRMAL KIPYSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-87 | 6 | 296 | 305 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 3.0e-91 | 5 | 304 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-98 | 1 | 304 | 306 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-100 | 3 | 296 | 302 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 5 | 316 | 6 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 277 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 8 | 308 | 7 | 297 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-25 | 3 | 288 | 6 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-25 | 3 | 288 | 6 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 5e-25 | 3 | 288 | 6 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292729 | 314 | 1 | 313 | 0 |
GR994392 | 306 | 1 | 306 | 0 |
DY292725 | 301 | 1 | 301 | 0 |
ES794113 | 290 | 1 | 290 | 0 |
ES794113 | 32 | 286 | 317 | 0.0005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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