y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g05950.1 |
Family | GT8 |
Protein Properties | Length: 535 Molecular Weight: 61270.2 Isoelectric Point: 8.294 |
Chromosome | Chromosome/Scaffold: 13 Start: 6256085 End: 6263381 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 174 | 505 | 0 |
CLSLRLTDEYSSNANARKQLPPPELLPTLSDNSYHHFIVSTDNILAASVVVTSTVQSSQKPENIVFHVITDKKTYAGMHSWFALNPVTPAIVEVRGIHQF DWLTRENVPVLEAVENQNGIRNYYHGNHFTGTNLSDTNPYKFASKLQARSPKYISLLNHLRIYIPELFPNLDKVVFLDDDVVVQRDLSPLWEIDMNGKVN GAVETCRGDDQWVMSKHFRNYFNFSHPLVAQHLDPDECAWAYGMNVFDLRAWRTTNIRETYHTWLKENLRSNLTMWKLGTLPPALIAFKGHVHPIGPSWH MLGLGYQNKTDIESVRKAAVIHFNGQSKPWLQ |
Full Sequence |
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Protein Sequence Length: 535 Download |
MQLHFSPSMR SITISSNNGF IDLMKIKVAA CHISYRTLFH TILILAFLLP FVFILTALVT 60 LEGVNKCSSF DCLGRRLGPK LLGRVDDPAQ RLVRDLYNIL NEVKTGEIPS ALELPDSFDQ 120 LVSDMKNNQY DAKTFAFMLR GMMQKFEREI RESKFSELMN KHFAASSVPK GIHCLSLRLT 180 DEYSSNANAR KQLPPPELLP TLSDNSYHHF IVSTDNILAA SVVVTSTVQS SQKPENIVFH 240 VITDKKTYAG MHSWFALNPV TPAIVEVRGI HQFDWLTREN VPVLEAVENQ NGIRNYYHGN 300 HFTGTNLSDT NPYKFASKLQ ARSPKYISLL NHLRIYIPEL FPNLDKVVFL DDDVVVQRDL 360 SPLWEIDMNG KVNGAVETCR GDDQWVMSKH FRNYFNFSHP LVAQHLDPDE CAWAYGMNVF 420 DLRAWRTTNI RETYHTWLKE NLRSNLTMWK LGTLPPALIA FKGHVHPIGP SWHMLGLGYQ 480 NKTDIESVRK AAVIHFNGQS KPWLQIGFDH LRPFWNKYVN YTNDFVRNCH ILDS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 5.0e-117 | 91 | 531 | 454 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-121 | 130 | 531 | 408 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-167 | 1 | 532 | 546 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 534 | 534 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 534 | 535 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001118545.1 | 0 | 1 | 533 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_186753.2 | 0 | 1 | 533 | 1 | 533 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002284273.1 | 0 | 1 | 534 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305374.1 | 0 | 9 | 534 | 1 | 527 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002324094.1 | 0 | 19 | 534 | 13 | 527 | glycosyltransferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000004 | 309 | 503 | 63 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000005 | 309 | 503 | 63 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000005 | 309 | 503 | 63 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |