Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g05950.4 |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 61142.1 Isoelectric Point: 8.294 |
Chromosome | Chromosome/Scaffold: 13 Start: 6256087 End: 6263320 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 173 | 504 | 0 |
CLSLRLTDEYSSNANARKQLPPPELLPTLSDNSYHHFIVSTDNILAASVVVTSTVQSSQKPENIVFHVITDKKTYAGMHSWFALNPVTPAIVEVRGIHQF DWLTRENVPVLEAVENQNGIRNYYHGNHFTGTNLSDTNPYKFASKLQARSPKYISLLNHLRIYIPELFPNLDKVVFLDDDVVVQRDLSPLWEIDMNGKVN GAVETCRGDDQWVMSKHFRNYFNFSHPLVAQHLDPDECAWAYGMNVFDLRAWRTTNIRETYHTWLKENLRSNLTMWKLGTLPPALIAFKGHVHPIGPSWH MLGLGYQNKTDIESVRKAAVIHFNGQSKPWLQ |
Full Sequence |
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Protein Sequence Length: 534 Download |
MQLHFSPSMR SITISSNNGF IDLMKIKVAA CHISYRTLFH TILILAFLLP FVFILTALVT 60 LEGVNKCSSF DCLGRRLGPK LLGRVDDPAR LVRDLYNILN EVKTGEIPSA LELPDSFDQL 120 VSDMKNNQYD AKTFAFMLRG MMQKFEREIR ESKFSELMNK HFAASSVPKG IHCLSLRLTD 180 EYSSNANARK QLPPPELLPT LSDNSYHHFI VSTDNILAAS VVVTSTVQSS QKPENIVFHV 240 ITDKKTYAGM HSWFALNPVT PAIVEVRGIH QFDWLTRENV PVLEAVENQN GIRNYYHGNH 300 FTGTNLSDTN PYKFASKLQA RSPKYISLLN HLRIYIPELF PNLDKVVFLD DDVVVQRDLS 360 PLWEIDMNGK VNGAVETCRG DDQWVMSKHF RNYFNFSHPL VAQHLDPDEC AWAYGMNVFD 420 LRAWRTTNIR ETYHTWLKEN LRSNLTMWKL GTLPPALIAF KGHVHPIGPS WHMLGLGYQN 480 KTDIESVRKA AVIHFNGQSK PWLQIGFDHL RPFWNKYVNY TNDFVRNCHI LDS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 2.0e-117 | 89 | 530 | 455 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 3.0e-121 | 129 | 530 | 408 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-167 | 1 | 531 | 545 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 533 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001118545.1 | 0 | 1 | 532 | 1 | 532 | GAUT13 (Galacturonosyltransferase 13); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_197051.2 | 0 | 1 | 532 | 1 | 532 | GAUT14 (Galacturonosyltransferase 14); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002284273.1 | 0 | 1 | 533 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305374.1 | 0 | 9 | 533 | 1 | 527 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002324094.1 | 0 | 19 | 533 | 13 | 527 | glycosyltransferase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000004 | 308 | 502 | 63 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000004 | 308 | 502 | 63 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000004 | 308 | 502 | 63 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |