| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g20080.2 |
| Family | GT43 |
| Protein Properties | Length: 346 Molecular Weight: 39600.8 Isoelectric Point: 10.7527 |
| Chromosome | Chromosome/Scaffold: 13 Start: 23548353 End: 23550786 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 119 | 324 | 0 |
| LANTIKLVPQPLLWIVVEGQTDSTELSKTLRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRYIDRVFGTW PTASLAANRKKVMIEGPVCDSSKVIGWHLRNMNNETDIITPPIHISSFAFNSSILWDPERWGRTSSLQDTSQNSIKFVKEVVLEDQEKLRGIPPEDCSRI LLWRFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 346 Download |
| MGSVERSRKK VMSWKKAMVH FSLCFVMGFF TGFAPTGKSI FHSHVDYSNR SEFAPQPIEV 60 SQKTTNVNRS WIAPTPRSLV HKQKLHVKIG PQLKPRRLII IVTPTSTKLP FQTVILARLA 120 NTIKLVPQPL LWIVVEGQTD STELSKTLRK TGIMYRHLVS KENFTDLEAE LNHQRNLALK 180 HIVHHRLSGI VHFAELSNVY DLEFFQQLRY IDRVFGTWPT ASLAANRKKV MIEGPVCDSS 240 KVIGWHLRNM NNETDIITPP IHISSFAFNS SILWDPERWG RTSSLQDTSQ NSIKFVKEVV 300 LEDQEKLRGI PPEDCSRILL WRFNFHARTT SNHKFPTTAS GVIRK* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 2.0e-53 | 119 | 329 | 225 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 3.0e-74 | 97 | 325 | 235 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 0 | 1 | 331 | 346 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33319.1 | 0 | 1 | 325 | 1 | 339 | secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides] |
| GenBank | ABP65661.1 | 0 | 1 | 325 | 1 | 339 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
| EMBL | CAI68031.1 | 0 | 1 | 333 | 1 | 338 | beta-3-glucuronyltransferase [Medicago truncatula] |
| EMBL | CAI93178.1 | 0 | 1 | 340 | 1 | 355 | glycosyltransferase [Populus balsamifera] |
| RefSeq | XP_002323456.1 | 0 | 1 | 325 | 1 | 340 | glycosyl transferase [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.00000000000002 | 99 | 329 | 5 | 233 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1v84_A | 0.00000000000002 | 99 | 329 | 5 | 233 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1v83_B | 0.00000000000002 | 99 | 329 | 5 | 233 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1v83_A | 0.00000000000002 | 99 | 329 | 5 | 233 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 1v82_B | 0.00000000000002 | 99 | 329 | 5 | 233 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
