| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g23000.1 |
| Family | GT47 |
| Protein Properties | Length: 297 Molecular Weight: 34485.1 Isoelectric Point: 9.6452 |
| Chromosome | Chromosome/Scaffold: 13 Start: 26475109 End: 26476577 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 2 | 247 | 0 |
| LPISVAQIVRYVYNPLTTYSRDQLMWITIDYTNIIAHRYPYWNRTRGADHFLASCHDWAPPDISRAESGKELFKNIISVSYSPLDFIFFYFLVLYNANKS EGFKPEKDVPMPEVNLQGFKLSSPILGLDPNNRSILAFFAGGVHGRIREILLQHWKDKDEEVQVHEYLPKGVDYHGLMGQSKFCLCPSGYEVASPRIVES INIGCVPVIVSDYYQLPFSDVLDRSKFSLHIPSRRIAEIKTMLKNV | |||
| Full Sequence |
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| Protein Sequence Length: 297 Download |
| MLPISVAQIV RYVYNPLTTY SRDQLMWITI DYTNIIAHRY PYWNRTRGAD HFLASCHDWA 60 PPDISRAESG KELFKNIISV SYSPLDFIFF YFLVLYNANK SEGFKPEKDV PMPEVNLQGF 120 KLSSPILGLD PNNRSILAFF AGGVHGRIRE ILLQHWKDKD EEVQVHEYLP KGVDYHGLMG 180 QSKFCLCPSG YEVASPRIVE SINIGCVPVI VSDYYQLPFS DVLDRSKFSL HIPSRRIAEI 240 KTMLKNVPHA KYLKLQKRVM KVQRHFVLNR PAKSFNVFHM ILHSIWLRQL NIRLYH* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 3.0e-47 | 36 | 247 | 223 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABP03863.1 | 0 | 1 | 294 | 100 | 378 | Exostosin-like [Medicago truncatula] |
| RefSeq | NP_197526.4 | 0 | 1 | 294 | 130 | 407 | catalytic [Arabidopsis thaliana] |
| Swiss-Prot | Q3E9A4 | 0 | 1 | 294 | 188 | 465 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
| RefSeq | XP_002324625.1 | 0 | 1 | 294 | 56 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331028.1 | 0 | 2 | 296 | 57 | 334 | predicted protein [Populus trichocarpa] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO373511 | 273 | 23 | 295 | 0 |
| CO983212 | 250 | 47 | 294 | 0 |
| CX643922 | 261 | 34 | 294 | 0 |
| FD507587 | 233 | 1 | 233 | 0 |
| EG631371 | 264 | 31 | 294 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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