Basic Information | |
---|---|
Species | Glycine max |
Cazyme ID | Glyma13g23040.3 |
Family | GT47 |
Protein Properties | Length: 398 Molecular Weight: 46120.9 Isoelectric Point: 9.5637 |
Chromosome | Chromosome/Scaffold: 13 Start: 26502178 End: 26505084 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 60 | 346 | 0 |
KRFKVWVYEEGDQPLVHYGPVNDIYAIEGQFIDEMDNSKRSPFKAKNPDEAHAFFLPFSVVNVVHYAYKPYMSQNDYRRDRLQRLVEDYIVVVADKYPYW NRSNGADHFLLSCHDWAPEISHANPDLFKNFIRVLCNANNSEGFQPKRDVSIPEVYLSVGKLGPPNLGQHPMNRTILAFFSGGAHGDIRKLLLKHWKDKD NQVQVHEYLPKGQNYTELMGLSKFCLCPSGYEVASPRVVEAINAVCVPVIISENYSLPLSDVLNWSQFSIQISVENIPDIKTILQNV |
Full Sequence |
---|
Protein Sequence Length: 398 Download |
MKRTSFDVVE EGLAKARASI REAILSRNHS NSGKQEDFIP KGSIYRNPHA FHQSHIEMVK 60 RFKVWVYEEG DQPLVHYGPV NDIYAIEGQF IDEMDNSKRS PFKAKNPDEA HAFFLPFSVV 120 NVVHYAYKPY MSQNDYRRDR LQRLVEDYIV VVADKYPYWN RSNGADHFLL SCHDWAPEIS 180 HANPDLFKNF IRVLCNANNS EGFQPKRDVS IPEVYLSVGK LGPPNLGQHP MNRTILAFFS 240 GGAHGDIRKL LLKHWKDKDN QVQVHEYLPK GQNYTELMGL SKFCLCPSGY EVASPRVVEA 300 INAVCVPVII SENYSLPLSD VLNWSQFSIQ ISVENIPDIK TILQNVTQKK YKKLYRNVRR 360 VRRHFVMHRP AKPFDLMHMI IHSIWLRRLN FRLMASH* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-65 | 58 | 346 | 307 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP03872.1 | 0 | 4 | 393 | 77 | 465 | Exostosin-like [Medicago truncatula] |
GenBank | ABP03873.1 | 0 | 4 | 396 | 235 | 616 | Exostosin-like [Medicago truncatula] |
EMBL | CBI21065.1 | 0 | 2 | 393 | 11 | 400 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25537.1 | 0 | 3 | 393 | 85 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 3 | 393 | 4 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EC939466 | 293 | 3 | 294 | 0 |
JK524792 | 253 | 42 | 294 | 0 |
FD507587 | 230 | 102 | 331 | 0 |
CO983212 | 236 | 164 | 398 | 0 |
FE523338 | 293 | 34 | 322 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|