| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g24550.1 |
| Family | CBM57 |
| Protein Properties | Length: 627 Molecular Weight: 69322 Isoelectric Point: 7.3485 |
| Chromosome | Chromosome/Scaffold: 13 Start: 27903035 End: 27908657 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 223 | 361 | 3e-25 |
| QHIKSFGEEYESDQPRSVETRIKHASHPPNFYPETLYQSALVSTDSQPDLTYTLEVDPNRNYSIWLHFAEIDNSVTAAGQRVFNIIINDDLVFKDVDIVE LSGDIYNALVLNTTVTVNGRILTIILKPKEGNLAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 627 Download |
| MLLRFLKLWM MLCFACVSSA ARLDPFALRL SCGARQNVHS KPTNTLWRED FGYTGGIAAN 60 ATLPSLITPP LNTLRYFPWS EGPQNCYNIN KVPKGHYSIR IFFGLVGQSK DISEPLFDIS 120 IEGTQLYSLK PGWNYQIDQV FAEALVFLTN DSVSICFHST GHGDPAILSI EIQQIDDKAY 180 YFDPQWSQGI ILRTVKRLSC GFGQSKFDVD YGGDSRGGDR FWQHIKSFGE EYESDQPRSV 240 ETRIKHASHP PNFYPETLYQ SALVSTDSQP DLTYTLEVDP NRNYSIWLHF AEIDNSVTAA 300 GQRVFNIIIN DDLVFKDVDI VELSGDIYNA LVLNTTVTVN GRILTIILKP KEGNLAIINA 360 IEIFEVIMAE SKTISEEVSA LQTLKKALGL PPRFGWNGDP CVPQQHPWIG VDCQLNKSSG 420 SWVIDGLGLH NQGLKGFLPD DISRLLNLQI LNLSRNNIHG AIPSSLGTIT SLQVLDLSYN 480 LFSGSIPESL GQLTSLQRLN LNSNLLSGRV PATVGGRLLY RASFNFTDNA GLCGIPGLPT 540 CGPHLSGGGK VGIGLGASFT FLLLITCSFC WWKRRQNILR AQQIAARAAP YAKARTHFSR 600 DIQMTRHHNN YGKTSTAAEN GPILLS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-10 | 427 | 541 | 118 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-18 | 217 | 361 | 163 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 7.0e-66 | 30 | 366 | 353 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 8 | 626 | 625 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 25 | 626 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 1 | 626 | 1 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 28 | 626 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 28 | 626 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 2 | 626 | 1 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.00000000000002 | 434 | 548 | 644 | 755 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3rgz_A | 0.000000002 | 423 | 514 | 467 | 558 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3rgz_A | 0.0000001 | 427 | 512 | 399 | 484 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3rgz_A | 0.0000007 | 434 | 515 | 454 | 535 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3rgz_A | 0.00001 | 441 | 511 | 195 | 264 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
