| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g25560.1 |
| Family | CE8 |
| Protein Properties | Length: 581 Molecular Weight: 63581.4 Isoelectric Point: 9.7484 |
| Chromosome | Chromosome/Scaffold: 13 Start: 28785002 End: 28788818 |
| Description | root hair specific 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 274 | 564 | 0 |
| DIVVAKDGSGKFKTITAALKHVPEKSDKRTVIYVKKGVYYENVRVEKTKWNVMIIGDGMNATIVSGSLNFVDGTPTFSTATFAVFGKNFIARDMGFRNTA GPQKHQAVALMTSADQAVYYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIFPRVPMQGQQNTITAQGKTDPNMNTGISIQSCNIA PFGDLSSVKTYLGRPWKNYSTTVFMQSTLGSFIHPNGWLPWVGDSAPDTIFYAEFQNVGPGSSTKNRVKWKGLKTITKKQASMFTVNAFLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 581 Download |
| MSSFKSYGKV DESEQARLEA RRKTGKRVTI IALSTIVLIG VVCAAVFGTV AHNNSDNNDG 60 VNSNSAPFLS NSVKSVCDLT LYKGACYSSI GPLVHSGQVR PEKLFLLSIE VALAEASRAV 120 EYFSEKGVFN GLINVDNKTM EGFKNCKDLL GLAVDHLNSS LASGGKSSLL DVLEDLRTWL 180 SAAGTYQQTC IDGFGEAGEA LKTSVVNNLK NSTEFTSNSL AIVTWLNKAA STVNLRRLLS 240 TTLPHHHHMV EPKWLHSKDR KLIQKDDNLK RKADIVVAKD GSGKFKTITA ALKHVPEKSD 300 KRTVIYVKKG VYYENVRVEK TKWNVMIIGD GMNATIVSGS LNFVDGTPTF STATFAVFGK 360 NFIARDMGFR NTAGPQKHQA VALMTSADQA VYYRCQIDAF QDSLYAHSNR QFYRECNIYG 420 TVDFIFGNSA VVLQNCNIFP RVPMQGQQNT ITAQGKTDPN MNTGISIQSC NIAPFGDLSS 480 VKTYLGRPWK NYSTTVFMQS TLGSFIHPNG WLPWVGDSAP DTIFYAEFQN VGPGSSTKNR 540 VKWKGLKTIT KKQASMFTVN AFLSGEKWIT ASGAPFKSST * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 6.0e-161 | 8 | 576 | 582 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 4.0e-172 | 4 | 577 | 606 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 0 | 4 | 578 | 575 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 3 | 579 | 597 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 274 | 566 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29155.1 | 0 | 1 | 577 | 1 | 558 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273396.1 | 0 | 1 | 577 | 4 | 561 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311918.1 | 0 | 1 | 577 | 1 | 565 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316458.1 | 0 | 1 | 577 | 1 | 566 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 577 | 1 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 274 | 576 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 273 | 576 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-19 | 276 | 563 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-19 | 276 | 563 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-19 | 276 | 563 | 7 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
