| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g26700.1 |
| Family | GH2 |
| Protein Properties | Length: 1122 Molecular Weight: 126569 Isoelectric Point: 6.118 |
| Chromosome | Chromosome/Scaffold: 13 Start: 29892776 End: 29902554 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH2 | 92 | 986 | 0 |
| VKSLSGYWKFFIADSPNNVPTYFYESEFQDSGWKTLPVPSNWQLHGFDTPIYTNVVYPFPLDPPFIPVENPTGCYRTYFHIPKEWEGRRVLLHFEAVDSA FCAWINGHPVGYSQDSRLPAEFEITDFCHPCGSDLKNVLAVQVFRWCDGSYLEDQDQWRLSGIHRDVLLMAKPEVFITDYFFKSNLAEDFSCAEIMVEVK IDRLQETSKDNVLTNYSIEATLFDSGSWYTSDGNPDLLSSNVADIKLQSSSAPAQPLGFHGYVLTGKLKSPKLWSAEKPYLYTLVVVLKDRSGRIVDCES CPVGFRKVSKAHKQLLVNGHAVVIRGVNRHEHHPQVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHHFDYSKHLK HPTMEPKWATSMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFALAGWIRGRDSSRVLHYEGGGSRTPCTDIVCPMYMRVWDMVKIANDPTETRPLIL CEYSHAMGNSNGNLHIYWEAIDNTFGLQGGFIWDWVDQALVKVYEDGTKHWAYGGEFGDVPNDLNFCLNGLTFPDRTPHPVLHEVKYLYQPIKVALKEGK LEIKNTHFFQTTEGLEFSWSISADGYNLGSGLLGLVPIKPQSSHAVDWQSGPWYSLWASTDEEELFLTITAKLLNSTRWVEAGHIVSSAQVQLPTRRNIA PHVIDINGGTLVAETLGDTIVVKQQDAWDLTLNTKTGLVESWKVKGVHVMKKGILPCFWRAPIDNDKGGGSASYLSRWKAAGMDCLHFITESCSVQNITE NSVRILVVFLGVTKGEDGSLSNQDKSKVLFTTEMAYTIYASGDVIIECNVKPNPDLPPLPRVGIELNVEKSLDQVTWYGRGPFECYPDRKAAALV | |||
| Full Sequence |
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| Protein Sequence Length: 1122 Download |
| MMASSSLVVV GSLHLTSQNG YKVWEDPSFI KWRKRDPHVT LHCHESLEGS LKYWYQRNKV 60 DFLASQSAVW NDDAVQGSLD CAAFWVKDLP FVKSLSGYWK FFIADSPNNV PTYFYESEFQ 120 DSGWKTLPVP SNWQLHGFDT PIYTNVVYPF PLDPPFIPVE NPTGCYRTYF HIPKEWEGRR 180 VLLHFEAVDS AFCAWINGHP VGYSQDSRLP AEFEITDFCH PCGSDLKNVL AVQVFRWCDG 240 SYLEDQDQWR LSGIHRDVLL MAKPEVFITD YFFKSNLAED FSCAEIMVEV KIDRLQETSK 300 DNVLTNYSIE ATLFDSGSWY TSDGNPDLLS SNVADIKLQS SSAPAQPLGF HGYVLTGKLK 360 SPKLWSAEKP YLYTLVVVLK DRSGRIVDCE SCPVGFRKVS KAHKQLLVNG HAVVIRGVNR 420 HEHHPQVGKA NIESCMIKDL VLMKQNNINA VRNSHYPQHP RWYELCDLFG MYMIDEANIE 480 THHFDYSKHL KHPTMEPKWA TSMLDRVIGM VERDKNHTCI ISWSLGNESG FGTNHFALAG 540 WIRGRDSSRV LHYEGGGSRT PCTDIVCPMY MRVWDMVKIA NDPTETRPLI LCEYSHAMGN 600 SNGNLHIYWE AIDNTFGLQG GFIWDWVDQA LVKVYEDGTK HWAYGGEFGD VPNDLNFCLN 660 GLTFPDRTPH PVLHEVKYLY QPIKVALKEG KLEIKNTHFF QTTEGLEFSW SISADGYNLG 720 SGLLGLVPIK PQSSHAVDWQ SGPWYSLWAS TDEEELFLTI TAKLLNSTRW VEAGHIVSSA 780 QVQLPTRRNI APHVIDINGG TLVAETLGDT IVVKQQDAWD LTLNTKTGLV ESWKVKGVHV 840 MKKGILPCFW RAPIDNDKGG GSASYLSRWK AAGMDCLHFI TESCSVQNIT ENSVRILVVF 900 LGVTKGEDGS LSNQDKSKVL FTTEMAYTIY ASGDVIIECN VKPNPDLPPL PRVGIELNVE 960 KSLDQVTWYG RGPFECYPDR KAAALVAVYE HNVSELHVPY IVPGESSGRA DVRWATFRNK 1020 DAFGIYASKY GSSPPMQMSA SYYSTSELDR ATHNEELIEG DSIEIHLDHK HMGLGGDDSW 1080 SPCVHEQYLI PPVPYSFSVR LCPVNPATSG HDIYKSQFQN S* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 8.0e-93 | 817 | 1101 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| pfam02836 | Glyco_hydro_2_C | 1.0e-100 | 404 | 684 | 291 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 1.0e-155 | 92 | 985 | 902 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| PRK09525 | lacZ | 0 | 90 | 1103 | 1053 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 0 | 93 | 1105 | 1017 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 9 | 1120 | 4 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 9 | 1120 | 4 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 18 | 1120 | 13 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 9 | 1120 | 4 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 1120 | 1 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3muy_4 | 0 | 92 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_3 | 0 | 92 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_2 | 0 | 92 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 3muy_1 | 0 | 92 | 1102 | 51 | 1021 | 1 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a) |
| PDB | 1jz7_D | 0 | 92 | 1102 | 51 | 1021 | A Chain A, E. Coli (Lacz) Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO804274 | 385 | 134 | 517 | 0 |
| GR858945 | 274 | 846 | 1119 | 0 |
| HO791335 | 272 | 1 | 272 | 0 |
| HO791335 | 86 | 271 | 356 | 0 |
| HO804274 | 50 | 508 | 556 | 0.00000000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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