Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g29640.1 |
Family | CBM57 |
Protein Properties | Length: 1017 Molecular Weight: 113247 Isoelectric Point: 5.5932 |
Chromosome | Chromosome/Scaffold: 13 Start: 32511753 End: 32522002 |
Description | receptor-like kinase in flowers 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 408 | 577 | 4.6e-26 |
LHVNCGGKDVNVKDDKGENLYVGDDVQGGTATYFYSSNDHWGFSSTGDFMDDFDGQNIRYTVSSPSSNMPELYKTARISPITLTYFHNCMENGNYTVNLH FAEIQFTNDKTFRSLGKRIFDIYVQGKLIRKNFDIENETNVAEKPLVLPIYNISITNNVLEIRFYWAGKG |
Full Sequence |
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Protein Sequence Length: 1017 Download |
MGVANFSVFL LIISLSFFQL LRISESKLPK EEVDALKEIV STMGATYWKF DADSCNIEMV 60 GVTLEPPDES ERRIGCDCSF EDGTVCHVVN MTLKRLSLPG ILPPQLAKLP FLRFVDFAYN 120 CFTGTIPEEW ASLNLTSISL LVNRLSGEIP KHLGNITSLT YLMLEANQFS GDVPTELGKL 180 INLQTLVLSS NQLTGSFPPS LAGLQNLTDF RISNNNFTGT IPNFIQNWQQ LKRLEMHGSG 240 LEGPIPSNIS LLNNLEQLRI SDIESPSQDF PFLGNMAGLI TLVLRNCNLS GVIPSYIWTM 300 MALENLDVSF NMLVGQIPAV ISARRLRYIY LTGNILSGNI PNSVLKDGSS IDLSYNNFTW 360 QDDDQPACQD SIRNLNLNLF RSSIKENKLE EYVPCSKNFI CPRYSSCLHV NCGGKDVNVK 420 DDKGENLYVG DDVQGGTATY FYSSNDHWGF SSTGDFMDDF DGQNIRYTVS SPSSNMPELY 480 KTARISPITL TYFHNCMENG NYTVNLHFAE IQFTNDKTFR SLGKRIFDIY VQGKLIRKNF 540 DIENETNVAE KPLVLPIYNI SITNNVLEIR FYWAGKGTTR IPDVGVYGLL VSAFSVVSNS 600 RVCSNGEKKV SVSIIIAIVV GALCLVLFTS GFIWWKWKGF FRGKLRRAGT KDRDTQAGNF 660 SLEQIRVATD DFSSANKIGE GGFGPVYKGQ LLDGTFIAVK QLSSKSRQGN REFINEIGLI 720 SCVQHPNLVK LYGYCAEGEQ LLLVYEYLEN NSLARVLFGS ENKQLKLDWP TRFRICIGIA 780 KGLAFLHDES RFKIVHRDIK ASNVLLDDKL NPKISDFGLA KLDEAEKTHI STRVAGTIGY 840 MAPEYALWGY LTDKADVYSF GVVALEIVSG KSNNNYLPDD GSVCLLDRAC QLNQTRNLME 900 LIDERLGPDL NKMEVEKVVK IGLLCSNASP TLRPTMSEVV NMLEGHADIP DVIPEPSTYN 960 DDLRFKALRN LHQYQSKQSL SGNQSQSSMT HTFTSASGGN THTTSYIEDH SSVDSS* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00219 | TyrKc | 9.0e-48 | 677 | 943 | 276 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. | ||
smart00221 | STYKc | 5.0e-48 | 677 | 943 | 287 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. | ||
pfam00069 | Pkinase | 2.0e-48 | 677 | 941 | 278 | + Protein kinase domain. | ||
cd00180 | PKc | 4.0e-50 | 678 | 867 | 194 | + Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. | ||
pfam11721 | Malectin | 5.0e-51 | 407 | 594 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50043.1 | 0 | 1 | 973 | 19 | 981 | receptor-like serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | NP_174268.7 | 0 | 1 | 973 | 19 | 982 | RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | XP_002264679.1 | 0 | 32 | 998 | 5 | 995 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305711.1 | 0 | 33 | 986 | 1 | 915 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522277.1 | 0 | 43 | 997 | 1 | 904 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 656 | 945 | 16 | 308 | A Chain A, Elucidation Of The Substrate Specificity And Protein Structure Of Abfb, A Family 51 Alpha-L-Arabinofuranosidase From Bifidobacterium Longum. |
PDB | 3uim_A | 0 | 656 | 945 | 16 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 656 | 945 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 656 | 945 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 656 | 945 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |