| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g36860.2 |
| Family | CBM43 |
| Protein Properties | Length: 177 Molecular Weight: 18958.2 Isoelectric Point: 5.5976 |
| Chromosome | Chromosome/Scaffold: 13 Start: 38084750 End: 38085936 |
| Description | plasmodesmata callose-binding protein 5 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 32 | 115 | 9.6e-30 |
| WCVAKNNAEDAALQSAVEWACGAGGADCGAIHGGGPCFDPSNMQNTASYAFNDYFRKHAISEENCNFGNNAAITSFNPSFGNCK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 177 Download |
| MSKREGFALC RFLIIILLWG FVAGDAPGRE VWCVAKNNAE DAALQSAVEW ACGAGGADCG 60 AIHGGGPCFD PSNMQNTASY AFNDYFRKHA ISEENCNFGN NAAITSFNPS FGNCKFPSSL 120 LVNNGSFSGS ASSMGTMSGE DTSGYSGVVW NWRWFSSFIV TTHFLFIVSP SRIVSW* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-6 | 32 | 102 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-20 | 32 | 116 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB68148.1 | 8.99998e-41 | 13 | 159 | 98 | 241 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_567060.1 | 3.00004e-41 | 13 | 159 | 22 | 165 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
| RefSeq | XP_002279275.1 | 0 | 30 | 168 | 34 | 170 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326029.1 | 1.99965e-42 | 1 | 134 | 1 | 138 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525141.1 | 1.00053e-42 | 29 | 147 | 30 | 148 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 6e-16 | 32 | 118 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
