Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g36860.3 |
Family | CBM43 |
Protein Properties | Length: 112 Molecular Weight: 11856.3 Isoelectric Point: 4.6817 |
Chromosome | Chromosome/Scaffold: 13 Start: 38084750 End: 38085936 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 32 | 109 | 4.9e-28 |
WCVAKNNAEDAALQSAVEWACGAGGADCGAIHGGGPCFDPSNMQNTASYAFNDYFRKHAISEENCNFGNNAAITSFNP |
Full Sequence |
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Protein Sequence Length: 112 Download |
MSKREGFALC RFLIIILLWG FVAGDAPGRE VWCVAKNNAE DAALQSAVEW ACGAGGADCG 60 AIHGGGPCFD PSNMQNTASY AFNDYFRKHA ISEENCNFGN NAAITSFNPI C* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-6 | 32 | 102 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-15 | 32 | 109 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 1e-32 | 13 | 109 | 63 | 159 | unknown [Arabidopsis thaliana] |
EMBL | CAB68148.1 | 2e-32 | 13 | 109 | 98 | 194 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 6e-33 | 13 | 109 | 22 | 118 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 2e-31 | 30 | 109 | 34 | 113 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 9e-32 | 1 | 109 | 1 | 113 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000008 | 32 | 109 | 13 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |