y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma13g38120.1 |
Family | GH14 |
Protein Properties | Length: 483 Molecular Weight: 55053.8 Isoelectric Point: 6.1555 |
Chromosome | Chromosome/Scaffold: 13 Start: 39028598 End: 39031021 |
Description | beta-amylase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 1 | 401 | 0 |
LGVVTNDNVLQDRVGLESQLKELHAAGVDGVMVDVWWGTVESIGPQQYDWSAYRTFYNVIPQMWGDWGNVGDSVLISLPKWILEIGELDPDIFYTNRKGV RNKECLSLGVDNQPLFHGRTAIELYTDYMQSFKDNMEDFLKSELMIDIEVGLGPAGELRYPSYTKNLGWVFPGIGEFQYLKADFKEVALKAGHPEWELPD NAGESNDVPESTEFFKSGGTYKTEKGKFFLTWYSNKLLTHGDEILNKANNVFLGCKVKLAAKVAGIHWWYKTESHAAELTSGYYNLHNRDGYRPIARILS RHNAILNFTCLEMRNHEQPAKAKSGAQELVQQVLSGGWLESLEVAGENALARYDREAYNQILLNARPNGVNKYGPPTLKMYGVTYLRLSDKLMQQTNFNI F |
Full Sequence |
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Protein Sequence Length: 483 Download |
LGVVTNDNVL QDRVGLESQL KELHAAGVDG VMVDVWWGTV ESIGPQQYDW SAYRTFYNVI 60 PQMWGDWGNV GDSVLISLPK WILEIGELDP DIFYTNRKGV RNKECLSLGV DNQPLFHGRT 120 AIELYTDYMQ SFKDNMEDFL KSELMIDIEV GLGPAGELRY PSYTKNLGWV FPGIGEFQYL 180 KADFKEVALK AGHPEWELPD NAGESNDVPE STEFFKSGGT YKTEKGKFFL TWYSNKLLTH 240 GDEILNKANN VFLGCKVKLA AKVAGIHWWY KTESHAAELT SGYYNLHNRD GYRPIARILS 300 RHNAILNFTC LEMRNHEQPA KAKSGAQELV QQVLSGGWLE SLEVAGENAL ARYDREAYNQ 360 ILLNARPNGV NKYGPPTLKM YGVTYLRLSD KLMQQTNFNI FKAFVRKMHA NLDYCPDPEK 420 YYHFTVPMKR SEPKIPLEVL LEATKPVEPY PWKKETDMNL DVTGFLDYIV AIIVRIFKLK 480 VN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 9.0e-102 | 2 | 409 | 427 | + beta-amylase | ||
PLN00197 | PLN00197 | 4.0e-119 | 1 | 428 | 453 | + beta-amylase; Provisional | ||
PLN02905 | PLN02905 | 7.0e-120 | 1 | 409 | 427 | + beta-amylase | ||
PLN02803 | PLN02803 | 2.0e-129 | 41 | 408 | 385 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 1 | 478 | 496 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1Q6C | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1UKO | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
GenBank | AAY40266.1 | 0 | 1 | 461 | 21 | 495 | beta-amylase [Glycine max] |
DDBJ | BAA09462.1 | 0 | 1 | 461 | 21 | 495 | beta-amylase [Glycine max] |
Swiss-Prot | O22585 | 0 | 1 | 461 | 21 | 495 | AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uko_D | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1wdp_A | 0 | 1 | 461 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO782669 | 395 | 77 | 466 | 0 |
HO777976 | 467 | 9 | 461 | 0 |
HO803971 | 389 | 68 | 452 | 0 |
HO805109 | 330 | 95 | 420 | 0 |
HO805109 | 66 | 418 | 482 | 1e-22 |
Sequence Alignments (This image is cropped. Click for full image.) |
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