| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma13g39700.1 |
| Family | GT47 |
| Protein Properties | Length: 459 Molecular Weight: 52344.9 Isoelectric Point: 9.9425 |
| Chromosome | Chromosome/Scaffold: 13 Start: 40242295 End: 40245002 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 96 | 395 | 0 |
| KNMKVFVYELPPKYNTDWLANERCSNHLFASEVAIHRALLTSEVRTFDPYEADFFFVPVYVSCNFSAVNGFPAIGHARTLISSAVNLVSTEYPFWNRSRG SDHVFVASHDFGACFHTLEDVAMADGIPKILKNSIVLQTFGVIHPHPCQDVENVVIPPYVAPESVRSTLEKFPVNGRRDIWAFFRGKMEVHPKNVSGQFY SKRVRTEIWRKFNGDRRFYLQRRRFAGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFSSAVRWSEISLTVAERDVGKLGKILERV | |||
| Full Sequence |
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| Protein Sequence Length: 459 Download |
| MSEQKKPPKS RVFYLRMKLL HKQGNKPQQD KNNNWFHTYY KWVLWLSFSL YFFTSYLITS 60 NPNNTNTPTS HVSNSESNVV PRTLVESTSN TLGVLKNMKV FVYELPPKYN TDWLANERCS 120 NHLFASEVAI HRALLTSEVR TFDPYEADFF FVPVYVSCNF SAVNGFPAIG HARTLISSAV 180 NLVSTEYPFW NRSRGSDHVF VASHDFGACF HTLEDVAMAD GIPKILKNSI VLQTFGVIHP 240 HPCQDVENVV IPPYVAPESV RSTLEKFPVN GRRDIWAFFR GKMEVHPKNV SGQFYSKRVR 300 TEIWRKFNGD RRFYLQRRRF AGYQLEIARS VFCLCPLGWA PWSPRLVESV ALGCVPVVIA 360 DGIRLPFSSA VRWSEISLTV AERDVGKLGK ILERVAATNL SVIQKSLWDP GTRRALLFNN 420 NKKVEEGDAT WQVMVSLSEK LGRSYRRSLV GDQLKSDT* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 8.0e-76 | 96 | 395 | 307 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAX33322.1 | 0 | 17 | 446 | 1 | 435 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
| GenBank | ABI64067.1 | 0 | 17 | 453 | 1 | 442 | glycosyltransferase GT47C [Populus tremula x Populus alba] |
| RefSeq | XP_002275679.1 | 0 | 1 | 441 | 1 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314302.1 | 0 | 3 | 453 | 4 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523710.1 | 0 | 1 | 453 | 1 | 461 | transferase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797103 | 367 | 93 | 459 | 0 |
| DY287013 | 325 | 130 | 453 | 0 |
| CK261693 | 318 | 122 | 439 | 0 |
| FC898195 | 280 | 132 | 410 | 0 |
| EG481525 | 275 | 94 | 366 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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