Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g01830.1 |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40839.8 Isoelectric Point: 4.6965 |
Chromosome | Chromosome/Scaffold: 14 Start: 1055906 End: 1061089 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 53 | 362 | 0 |
IVVDQSGKGDSTTVQGAVDMVPQNNTERVKIYIYPGIYRERVHVPKSKPFISFIGKPNITMNEREANITANAQNITEIANAIPIITNSTKASDKGNDGQE MGTVSTATVWVESDFFCATALTIENLVDKDADKRQAVALRVDGDKAVFYRVRLVGEQDTLLDNTGIHYFYRSYIQGSVDFICGNAKSLFHECVLDSVAEF WGAIAAHHRDSADEDTGFSFVNCTIKGSGSVFLGRAWGKYAATTYSFCDMDHVILPLGWSDWGDPSRQGTAMFGEYECSGKGSNRTERVEWSKALSSEEA MPFLSRDYIY |
Full Sequence |
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Protein Sequence Length: 370 Download |
MSLLSTLVSL VLLLKCVQVQ GDTDSDHARN FITWEDFMVD EQGITSNVGG RIIVVDQSGK 60 GDSTTVQGAV DMVPQNNTER VKIYIYPGIY RERVHVPKSK PFISFIGKPN ITMNEREANI 120 TANAQNITEI ANAIPIITNS TKASDKGNDG QEMGTVSTAT VWVESDFFCA TALTIENLVD 180 KDADKRQAVA LRVDGDKAVF YRVRLVGEQD TLLDNTGIHY FYRSYIQGSV DFICGNAKSL 240 FHECVLDSVA EFWGAIAAHH RDSADEDTGF SFVNCTIKGS GSVFLGRAWG KYAATTYSFC 300 DMDHVILPLG WSDWGDPSRQ GTAMFGEYEC SGKGSNRTER VEWSKALSSE EAMPFLSRDY 360 IYGDGWLRL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 6.0e-83 | 48 | 367 | 324 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-94 | 51 | 367 | 323 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-103 | 52 | 368 | 320 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-103 | 51 | 369 | 323 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 4.0e-157 | 29 | 369 | 348 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 53 | 369 | 75 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 3 | 369 | 12 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 7 | 369 | 12 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 49 | 369 | 16 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 27 | 369 | 54 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 7e-36 | 50 | 368 | 6 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-32 | 54 | 368 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000003 | 45 | 298 | 25 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000001 | 99 | 246 | 32 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000001 | 99 | 246 | 32 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |