Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g02385.1 |
Family | CE8 |
Protein Properties | Length: 328 Molecular Weight: 36270.8 Isoelectric Point: 5.1732 |
Chromosome | Chromosome/Scaffold: 14 Start: 1441025 End: 1443235 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 32 | 315 | 0 |
ITVGRQGNFTFGSIQAAIDSIKTNNDRWIKIHIEAGLYIGKIYIPQEKPCIILEGEGSRKTIITFWDHIGIDTSATFTSEPPNVVATDIGFMNTYNSINR RIEIKPALAARIYGDKSFFLRCNFISYQDTLFDATGRHYFKNCYIEGEIDFIWGYGQSFYENCSINAVGINSTGPDFVTAQGRESPTDPSGFVFEGGSLV GDGKVNLGRAWRAYSRVIFHGTYLSSVVTPEGWNPWNYTGSESNFTYAEVDCKGPGADTSKRVKWIKTLNQSQLNEFSLTSFIN |
Full Sequence |
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Protein Sequence Length: 328 Download |
MNIYLVLAVS FLGGTILAES GDCGGKDISA TITVGRQGNF TFGSIQAAID SIKTNNDRWI 60 KIHIEAGLYI GKIYIPQEKP CIILEGEGSR KTIITFWDHI GIDTSATFTS EPPNVVATDI 120 GFMNTYNSIN RRIEIKPALA ARIYGDKSFF LRCNFISYQD TLFDATGRHY FKNCYIEGEI 180 DFIWGYGQSF YENCSINAVG INSTGPDFVT AQGRESPTDP SGFVFEGGSL VGDGKVNLGR 240 AWRAYSRVIF HGTYLSSVVT PEGWNPWNYT GSESNFTYAE VDCKGPGADT SKRVKWIKTL 300 NQSQLNEFSL TSFINKDGWI DNLPIIF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 6.0e-75 | 29 | 322 | 307 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-77 | 32 | 320 | 289 | + putative pectinesterase | ||
PLN02480 | PLN02480 | 2.0e-79 | 31 | 320 | 299 | + Probable pectinesterase | ||
PLN02176 | PLN02176 | 1.0e-98 | 21 | 327 | 311 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-111 | 31 | 325 | 300 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 31 | 324 | 44 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 31 | 324 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318946.1 | 0 | 18 | 325 | 22 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 3 | 325 | 5 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529267.1 | 0 | 26 | 326 | 34 | 339 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-40 | 28 | 320 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 6e-32 | 28 | 327 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.00000000000002 | 1 | 243 | 4 | 270 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000005 | 134 | 196 | 124 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000005 | 134 | 196 | 124 | 190 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |