y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g14025.1 |
Family | GT47 |
Protein Properties | Length: 484 Molecular Weight: 55345.7 Isoelectric Point: 9.5507 |
Chromosome | Chromosome/Scaffold: 14 Start: 13780147 End: 13786840 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 151 | 435 | 0 |
KIFKVYVYPDGDLPIAHDGPCKDIYSIEGRFLHEMEHGAGRFRTNDPNAAHVYFLPFSVTWMVKYLYTPLSFNVTPLKQFVSDYVRVISTRHPFWNITHG ADHFMLACHDWGPHASQGNPFLYNTSIRVLCNANTSEGFNPRKDVSLPEIHLYGGEVSPKLLSPPPDTAPRRYLAFFSGGLHGPIRPALLRHWKNDNDDD IRVYEYLPKDLDYYSFMLNSKFCLCPSGHEVASPRIVEAIYAECVPVILSEYYVLPFSDVLQWEAFSVQVDVSDIPRLKEILSAI |
Full Sequence |
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Protein Sequence Length: 484 Download |
MEIPRKYHFS PILSLILLSL IIVVLVLRSR QLLEFAPIAT GSKPPYSVPL DRLRTKLSGE 60 NPLHAVGNSG ELRRNKFRNR TATRKVGKLE QRLAAARAAM RKVASESEDE RGNLSVANTA 120 RDGDGDHRYV PAGAIYRNAR LFYRSYLEME KIFKVYVYPD GDLPIAHDGP CKDIYSIEGR 180 FLHEMEHGAG RFRTNDPNAA HVYFLPFSVT WMVKYLYTPL SFNVTPLKQF VSDYVRVIST 240 RHPFWNITHG ADHFMLACHD WGPHASQGNP FLYNTSIRVL CNANTSEGFN PRKDVSLPEI 300 HLYGGEVSPK LLSPPPDTAP RRYLAFFSGG LHGPIRPALL RHWKNDNDDD IRVYEYLPKD 360 LDYYSFMLNS KFCLCPSGHE VASPRIVEAI YAECVPVILS EYYVLPFSDV LQWEAFSVQV 420 DVSDIPRLKE ILSAISEDKY RKLKEGVKAV RGHFTLNRPA KRFDVFHMIL HSIWLRRLNI 480 KLR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-69 | 149 | 435 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21064.1 | 0 | 40 | 482 | 37 | 477 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197913.4 | 0 | 89 | 482 | 101 | 479 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002285237.1 | 0 | 149 | 482 | 1 | 333 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324871.1 | 0 | 149 | 482 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515489.1 | 0 | 16 | 482 | 19 | 480 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |