| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma15g05720.1 |
| Family | GH3 |
| Protein Properties | Length: 777 Molecular Weight: 83845.5 Isoelectric Point: 6.3463 |
| Chromosome | Chromosome/Scaffold: 15 Start: 4026057 End: 4030303 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 89 | 338 | 0 |
| SVSRLGIPKYEWWSEALHGVSNVGPGTHFSSLVPGATSFPMPILTAASFNASLFEAIGRVVSTEARAMYNVGLAGLTYWSPNINIFRDPRWGRGQETPGE DPLLSSKYATGYVKGLQQTDDGDSNKLKVAACCKHYTAYDLDNWKGIQRYTFNAVVTQQDMDDTFQPPFKSCVIDGNVASVMCSYNQVNGKPTCADPDLL KGIIRGEWKLNGYIVSDCDSVEVLFKDQHYTKTPEEAAAQTILAGLDLNC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 777 Download |
| MACAENRQPK VPVFLCFFSF TFVASVLLNC NRVSGQTSAV FACDVAKNPA LAGYGFCDKS 60 LSVEDRVADL VKRLTLQEKI GSLVNSATSV SRLGIPKYEW WSEALHGVSN VGPGTHFSSL 120 VPGATSFPMP ILTAASFNAS LFEAIGRVVS TEARAMYNVG LAGLTYWSPN INIFRDPRWG 180 RGQETPGEDP LLSSKYATGY VKGLQQTDDG DSNKLKVAAC CKHYTAYDLD NWKGIQRYTF 240 NAVVTQQDMD DTFQPPFKSC VIDGNVASVM CSYNQVNGKP TCADPDLLKG IIRGEWKLNG 300 YIVSDCDSVE VLFKDQHYTK TPEEAAAQTI LAGLDLNCGN YLGQYTEGAV KQGLLDEASI 360 NNAVSNNFAT LMRLGFFDGD PSKQPYGNLG PKDVCTSENR ELAREAARQG IVLLKNSPGS 420 LPLNAKTIKS LAVIGPNANA TRVMIGNYEG IPCNYISPLQ TLTALVPTSY AAGCPNVQCA 480 NAELDDATQI AASADATVII VGASLAIEAE SLDRINILLP GQQQLLVSEV ANASKGPVIL 540 VIMSGGGMDV SFAKSNDKIT SILWVGYPGE AGGAAIADVI FGFYNPSGRL PMTWYPQAYV 600 NKVPMTNMNM RADPATGYPG RTYRFYKGET VFSFGDGISF SSIEHKIVKA PQLVSVPLAE 660 DHECRSSECM SLDIADEHCQ NLAFDIHLGV KNTGKMSTSH VVLLFFTPPD VHNAPQKHLL 720 GFEKVHLPGK SEAQVRFKVD VCKDLSVVDE LGNRKVPLGQ HLLHVGNLKH PLSLRV* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 9.0e-54 | 411 | 606 | 203 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 1.0e-56 | 78 | 475 | 407 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 4.0e-66 | 61 | 366 | 314 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 1.0e-81 | 37 | 741 | 790 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 11 | 776 | 787 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | A5JTQ2 | 0 | 2 | 776 | 1 | 774 | XYL1_MEDVA RecName: Full=Beta-xylosidase/alpha-L-arabinofuranosidase 1; AltName: Full=Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 1; Short=MsXyl1; Includes: RecName: Full=Beta-xylosidase; AltName: Full=1,4-beta-D-xylan xylohydrolase; AltName: Full=Xylan 1,4-beta-xylosidase; Includes: RecName: Full=Alpha-N-arabinofuranosidase; AltName: Full=Alpha-L-arabinofuranosidase; Short=Arabinosidase; Flags: Precursor |
| Swiss-Prot | A5JTQ3 | 0 | 1 | 776 | 1 | 774 | XYL2_MEDVA RecName: Full=Beta-xylosidase/alpha-L-arabinofuranosidase 2; AltName: Full=Xylan 1,4-beta-xylosidase/Alpha-N-arabinofuranosidase 2; Short=MsXyl2; Includes: RecName: Full=Beta-xylosidase; AltName: Full=1,4-beta-D-xylan xylohydrolase; AltName: Full=Xylan 1,4-beta-xylosidase; Includes: RecName: Full=Alpha-N-arabinofuranosidase; AltName: Full=Alpha-L-arabinofuranosidase; Short=Arabinosidase; Flags: Precursor |
| EMBL | CBI39114.1 | 0 | 1 | 776 | 1 | 774 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264183.1 | 0 | 1 | 776 | 193 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002513707.1 | 0 | 26 | 776 | 26 | 777 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 79 | 739 | 61 | 696 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3u48_A | 0 | 79 | 739 | 61 | 696 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3u4a_B | 0 | 79 | 739 | 61 | 696 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 3u4a_A | 0 | 79 | 739 | 61 | 696 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 1j8v_A | 3e-40 | 56 | 614 | 5 | 589 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
