y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma15g16141.1 |
Family | CE8 |
Protein Properties | Length: 369 Molecular Weight: 40486.7 Isoelectric Point: 6.3086 |
Chromosome | Chromosome/Scaffold: 15 Start: 12446725 End: 12454208 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 86 | 310 | 0 |
AIVTQDATSQFATLSDALKTVPPKNVIVGKDMTHVTVIGDGPMYKDEIHRELKLECKIYNLLCELFVGERLQASASSPSQTSSAPVNAANFMAKDVGFEN TAGAEKHQAVALRVTADQAMFYNCQMDVFQDTPYTQSQRQFYHDCTITGTIDFVFKDAFGMFQNCKLIVRKPLPNQQCMVTAGGRSKAESPSALVFQSCH FSGEPQLTQLQPKIACLGRPWKTYG |
Full Sequence |
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Protein Sequence Length: 369 Download |
MGDYNDGKEQ QRRFAVLGIS SILLVAMVAA VGVTLNCGDK GEEENDDHHL HNAQRNNEET 60 LVDDYSSWVN EGQRRLLGLG GIKPNAIVTQ DATSQFATLS DALKTVPPKN VIVGKDMTHV 120 TVIGDGPMYK DEIHRELKLE CKIYNLLCEL FVGERLQASA SSPSQTSSAP VNAANFMAKD 180 VGFENTAGAE KHQAVALRVT ADQAMFYNCQ MDVFQDTPYT QSQRQFYHDC TITGTIDFVF 240 KDAFGMFQNC KLIVRKPLPN QQCMVTAGGR SKAESPSALV FQSCHFSGEP QLTQLQPKIA 300 CLGRPWKTYG PSADTSLRVK WSGVKTITSA AATNYYPGRF FELINSSTER DAWIVDARVP 360 YSLGSMAA* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 0.0004 | 4 | 44 | 43 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 2.0e-69 | 56 | 367 | 379 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 4.0e-77 | 63 | 361 | 356 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 7.0e-97 | 85 | 341 | 314 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85756.1 | 0 | 150 | 368 | 105 | 361 | unknown [Medicago truncatula] |
EMBL | CAB65290.2 | 0 | 48 | 368 | 195 | 549 | pectin methyl-esterase PER [Medicago truncatula] |
EMBL | CAB65291.1 | 0 | 63 | 366 | 227 | 565 | pectin methyl-esterase PEF1 [Medicago truncatula] |
Swiss-Prot | Q42920 | 0 | 63 | 366 | 109 | 447 | PME_MEDSA RecName: Full=Pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase; AltName: Full=P65; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 1e-39 | 82 | 331 | 1 | 287 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 3e-39 | 82 | 364 | 5 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 0.000000000001 | 85 | 306 | 32 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000004 | 85 | 306 | 5 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000004 | 85 | 306 | 5 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |