y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma15g20530.2 |
Family | CE8 |
Protein Properties | Length: 490 Molecular Weight: 54246.3 Isoelectric Point: 6.7854 |
Chromosome | Chromosome/Scaffold: 15 Start: 18388369 End: 18391574 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 198 | 472 | 0 |
TVVAADGTGNFTKVMDAVQAAPVYSMRRFVIHIKKGVYEENVVINKKKWNLVVIGEGMDATVISGNLSRSENLTTFKTATFAVNGRGFIAKGITFRNTAG PQRNQSVALRSDSDLSVFYRCGIFGYQDSLYAHSLRQFYRECRISGTVDFIFGHANAATFQGEMYPNRSSGFSIQFCNISADYDLLPYLNTTSTYLGRPW KPYSRTIFMQSYISDVLSPEGWLEWNGTLYLDTLLYAEYKNYGPGARLDNRVKWPGYHVMNDSREAYNFTVANLI |
Full Sequence |
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Protein Sequence Length: 490 Download |
MAVFSTKQLS TSTLTTTFII FFVRSEFTGH GSLRVSPSEF IGSVTTVGDV LQNVTSILKS 60 ELRSVKNDFH LPDAAVSTCL DLLDLSADEL SWSISAVQSS QGNDNSTGNL SSDLRTWLSA 120 VLANTDTCMD GFEGTNGNVK GLISTVIDQA KWLLQKLLTL VKPYVNDFSS RNSRVKFPSW 180 IEAEDKMLLQ TNGVPADTVV AADGTGNFTK VMDAVQAAPV YSMRRFVIHI KKGVYEENVV 240 INKKKWNLVV IGEGMDATVI SGNLSRSENL TTFKTATFAV NGRGFIAKGI TFRNTAGPQR 300 NQSVALRSDS DLSVFYRCGI FGYQDSLYAH SLRQFYRECR ISGTVDFIFG HANAATFQGE 360 MYPNRSSGFS IQFCNISADY DLLPYLNTTS TYLGRPWKPY SRTIFMQSYI SDVLSPEGWL 420 EWNGTLYLDT LLYAEYKNYG PGARLDNRVK WPGYHVMNDS REAYNFTVAN LILGELWLPS 480 TGVTFTPGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-136 | 31 | 489 | 502 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-141 | 60 | 489 | 452 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 1.0e-148 | 113 | 489 | 406 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-163 | 197 | 475 | 298 | + Pectinesterase. | ||
PLN02201 | PLN02201 | 0 | 33 | 489 | 487 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 33 | 489 | 45 | 526 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 23 | 489 | 32 | 507 | pectin methylesterase 4 [Pyrus communis] |
RefSeq | NP_189913.3 | 0 | 22 | 489 | 29 | 525 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 33 | 486 | 49 | 517 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 33 | 489 | 37 | 518 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 196 | 489 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 190 | 489 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 6e-17 | 208 | 443 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-17 | 208 | 443 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-17 | 208 | 443 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY290214 | 356 | 132 | 453 | 0 |
DR937739 | 283 | 226 | 489 | 0 |
GO330324 | 260 | 232 | 472 | 0 |
CV233766 | 270 | 239 | 489 | 0 |
EX523117 | 261 | 248 | 489 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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