| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma15g23435.2 |
| Family | CBM43 |
| Protein Properties | Length: 297 Molecular Weight: 31093.7 Isoelectric Point: 7.3624 |
| Chromosome | Chromosome/Scaffold: 15 Start: 22777926 End: 22781467 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 134 | 191 | 1.7e-25 |
| SSDCSAIQPGASCYNPNTLKDHASYAFNDYYQKNPAPTSCAFGGTATLTNKDPSNGNC | |||
| Full Sequence |
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| Protein Sequence Length: 297 Download |
| MGVRSWRHVL FSLCLVFNSG LCKATTLREE EHQEISYEFG TKLDAVPVVN PTTPGTTNPY 60 PTLNPTTPQA PGSTGQTPST PPTTPYMTPI NPYTNPTTPK TSPTNPYTNP TTPTMTPPSP 120 TTTPTTPTTP TTASSDCSAI QPGASCYNPN TLKDHASYAF NDYYQKNPAP TSCAFGGTAT 180 LTNKDPSNGN CRYTSSKTPS MTPPTPTYVS PPNPPSTMTP TTPTTMTPSA PSTMTPTTPG 240 IMTPTAPGMT TIPGGASVYG TGPAGSPNTA TFASHSEVLL LTLFGLWASL RVENYI* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-11 | 136 | 180 | 51 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-25 | 136 | 193 | 59 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 2e-30 | 28 | 193 | 43 | 230 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 2e-29 | 135 | 267 | 60 | 164 | unnamed protein product [Vitis vinifera] |
| GenBank | EAY75064.1 | 4e-24 | 135 | 196 | 116 | 177 | hypothetical protein OsI_02956 [Oryza sativa Indica Group] |
| RefSeq | NP_001043647.1 | 4e-24 | 135 | 196 | 116 | 177 | Os01g0631500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002271903.1 | 3e-29 | 135 | 267 | 155 | 259 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.00000000009 | 136 | 193 | 38 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Signal Peptide | |||||
|---|---|---|---|---|---|
| Cleavage Site | |||||
| 24 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV282922 | 59 | 135 | 193 | 3e-26 |
| EX293226 | 59 | 135 | 193 | 9e-26 |
| EX270033 | 59 | 135 | 193 | 1e-25 |
| FF541445 | 59 | 135 | 193 | 4e-25 |
| EV282922 | 46 | 1 | 44 | 0.0008 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Arabidopsis lyrata | 903671 | ||||
| Arabidopsis thaliana | AT2G42930.1 | ||||
| Capsella rubella | Carubv10024927m | ||||
| Sequence Alignments |
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| Phylogeny |
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