| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma15g35390.1 |
| Family | CE8 |
| Protein Properties | Length: 575 Molecular Weight: 63322.2 Isoelectric Point: 9.7344 |
| Chromosome | Chromosome/Scaffold: 15 Start: 40024903 End: 40028444 |
| Description | root hair specific 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 269 | 558 | 0 |
| IVVAKDDSGKFKTITAALKQVPDNSDKRTVIYVKKGVYDENVRVEKTKWNVMIIGDGMNATIVSGSLNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAG PQKQQAVALMTSADQAVYYRCQIDAFQDSLYAHSNRQFYRECNIYGTVDFIFGNSAVVLQNCNIMPRVPMQGQQNTITAQGKTDPNMNTGISIQNCNITP FGDLSSVKTYLGRPWKNYSTTVFMQSTMGSFIHPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVNWKGLRVITRKQASMFTVKAFLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 575 Download |
| MSFFKFYGKV DEAEHAMLEA RRKTRKRVTI IALSTIVLVG VVCAAVFGTV AHNNNNSNND 60 GVNNAPSLSN SVKAVCDVTL YKGACYSSLG PLVHSGQVRP EELFLLSIEV ALAEASRAVE 120 YFSQKGVFNG LNVDNRTMEG FKNCKDLLGL AVDHLNSSLA SGGKSSLFDV LEDLRTWLSA 180 AGTYQQTCID GLEEAKEALK TSVVNNLKNS TEFTSNSLAI VTWLNKAAST VNLRRLLSTL 240 PHHMVEPKWL HSKDRKLLQK DDLKRKAHIV VAKDDSGKFK TITAALKQVP DNSDKRTVIY 300 VKKGVYDENV RVEKTKWNVM IIGDGMNATI VSGSLNFVDG TPTFSTATFA VFGRNFIARD 360 MGFRNTAGPQ KQQAVALMTS ADQAVYYRCQ IDAFQDSLYA HSNRQFYREC NIYGTVDFIF 420 GNSAVVLQNC NIMPRVPMQG QQNTITAQGK TDPNMNTGIS IQNCNITPFG DLSSVKTYLG 480 RPWKNYSTTV FMQSTMGSFI HPNGWLPWVG NSAPDTIFYA EFQNVGPGAS TKNRVNWKGL 540 RVITRKQASM FTVKAFLSGE RWITASGAPF KSSI* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 1.0e-161 | 8 | 570 | 574 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 4.0e-170 | 4 | 571 | 601 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 0 | 4 | 572 | 569 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 4 | 574 | 588 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 0 | 268 | 560 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29155.1 | 0 | 1 | 574 | 1 | 561 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273396.1 | 0 | 1 | 574 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311918.1 | 0 | 1 | 574 | 1 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316458.1 | 0 | 1 | 574 | 1 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 574 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 268 | 570 | 8 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 267 | 570 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-21 | 270 | 557 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-21 | 270 | 557 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 3e-21 | 270 | 557 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
