y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma15g39060.1 |
Family | CBM43 |
Protein Properties | Length: 114 Molecular Weight: 12392.2 Isoelectric Point: 8.0344 |
Chromosome | Chromosome/Scaffold: 15 Start: 45625395 End: 45626955 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 30 | 110 | 6.4e-29 |
WCVAKPSSDQATLLANLNYACSQVDCRILQKGCPCSYPDNLMNHASIAMNLYYQSRGKNHWNCDFRASGLVVVTDPSYGNC |
Full Sequence |
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Protein Sequence Length: 114 Download |
MSNVSLLLFL VFLSLSSGAN LIMANGQKTW CVAKPSSDQA TLLANLNYAC SQVDCRILQK 60 GCPCSYPDNL MNHASIAMNL YYQSRGKNHW NCDFRASGLV VVTDPSYGNC IYA* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-12 | 29 | 94 | 72 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-29 | 29 | 112 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ86001.1 | 0 | 17 | 113 | 17 | 113 | unknown [Medicago truncatula] |
RefSeq | XP_002285661.1 | 0 | 17 | 113 | 18 | 114 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300444.1 | 0 | 18 | 113 | 20 | 115 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332529.1 | 0 | 22 | 113 | 29 | 120 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528491.1 | 0 | 4 | 113 | 6 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-22 | 29 | 112 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |