Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma16g01640.1 |
Family | CE8 |
Protein Properties | Length: 587 Molecular Weight: 63938.5 Isoelectric Point: 8.4465 |
Chromosome | Chromosome/Scaffold: 16 Start: 1208340 End: 1211609 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 571 | 0 |
AVVAQDGSGQFRTIGEALKLVKKKSEKRFVVHVKEGRYLENIDLDKNTWNVFIFGDGKDKTVVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAG ASKHQAVAFRSGSDRSVFFRCSFNGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPLPNQFNTITAQGKKDRNQNTGIIIQKSKFTP LENNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWMSWVPNVEPVSTIFYAEYQNTGPGADVSQRVKWAGYKPTLTDGEAGKFTVQSFIQG |
Full Sequence |
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Protein Sequence Length: 587 Download |
MDTIKSFKGY GKVDELEQQA YQKKTRKRLI IITVSSIVLI AVIIAAIAGV VIHKRNTSSS 60 PSSDSPPQTE LTPAASLKAV CDVTQYPNSC FSAISSLPDS NTTDPELLFK LSLRVAIDEL 120 SKLSSFPSKL RANAEHDARL QKAIDVCGNI FGDALDRLND SISALGSSGG AGKIISPASV 180 SDVETWISAA LTDQDTCLDA LGELNSTAAS GALREIETAM RNSTEFASNS LAIVTKILGL 240 LSQFAAPIHH RRLLGFPEWL GAAERRLLQV NSSETTLDAV VAQDGSGQFR TIGEALKLVK 300 KKSEKRFVVH VKEGRYLENI DLDKNTWNVF IFGDGKDKTV VVGSRNFMDG TPTFETATFA 360 VKGKGFIAKD IGFVNNAGAS KHQAVAFRSG SDRSVFFRCS FNGFQDTLYA HSNRQFYRDC 420 DITGTIDFIF GNAAAVFQNC KIMPRQPLPN QFNTITAQGK KDRNQNTGII IQKSKFTPLE 480 NNLTAPTYLG RPWKDFSTTV IMQSDIGSFL KPVGWMSWVP NVEPVSTIFY AEYQNTGPGA 540 DVSQRVKWAG YKPTLTDGEA GKFTVQSFIQ GPEWLPNAAV QFDSTL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 4.0e-147 | 77 | 575 | 520 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 1.0e-149 | 73 | 586 | 527 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 586 | 596 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 586 | 588 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 278 | 571 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 580 | 1 | 581 | pectinesterase, putative [Arabidopsis thaliana] |
Swiss-Prot | Q43111 | 0 | 1 | 586 | 1 | 581 | PME3_PHAVU RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265217.1 | 0 | 1 | 586 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304256.1 | 0 | 1 | 586 | 1 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532945.1 | 0 | 1 | 586 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 272 | 575 | 2 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 278 | 582 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-22 | 275 | 576 | 2 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-22 | 275 | 576 | 2 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-22 | 275 | 576 | 2 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |