| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g02110.3 |
| Family | GT5 |
| Protein Properties | Length: 620 Molecular Weight: 68109.4 Isoelectric Point: 7.0732 |
| Chromosome | Chromosome/Scaffold: 16 Start: 1626635 End: 1631183 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 93 | 591 | 0 |
| IIGTEVAPWCKTGGLGDVLGGLPPALAGFGHRVMTIVPRYDQYKDAWDTGVVIEVKVGDRTEKVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGQKLYGPT TGDDYEDNQLRFSLFCQAALEAPRVLSLNSSKYFSGPYGEDVIFVANDWHTALIPCYLKSMYQPRGIYMNARVVFCIHNIAYQGRFAFADFSLLNLPDQF KSSFDFIDGHVKPVVGRKINWLKAGLIESWFVITVSPNYAKELVSGPDKGVELDNILRKIDDDGRLVGIVNGMDVQEWNPTTDKYIAVKYDVSTVLEAKA LLKEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILAEAIPQFIKENVQLVALGTGKKQMEKQLQELEISYPDKARGVAKFNVPLAHMIIAGADFILVPS RFEPCGLIQLQAMRYGSVPIVASTGGLVDTVKEGFTGFQMGAFSVECDAVDPADVDAIAKTVKRALAVYGTPAFTEIIKNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 620 Download |
| MATLTASSNL VSRNSHVHHG PTTASYESKA VAMGLRSLKQ TNTHSGLRIF NPVDELLNRT 60 PIKTNAMQAM RKGPQGKNVW PKGIITCGMT FIIIGTEVAP WCKTGGLGDV LGGLPPALAG 120 FGHRVMTIVP RYDQYKDAWD TGVVIEVKVG DRTEKVRFFH CYKRGVDRVF VDHPWFLEKV 180 WGKTGQKLYG PTTGDDYEDN QLRFSLFCQA ALEAPRVLSL NSSKYFSGPY GEDVIFVAND 240 WHTALIPCYL KSMYQPRGIY MNARVVFCIH NIAYQGRFAF ADFSLLNLPD QFKSSFDFID 300 GHVKPVVGRK INWLKAGLIE SWFVITVSPN YAKELVSGPD KGVELDNILR KIDDDGRLVG 360 IVNGMDVQEW NPTTDKYIAV KYDVSTVLEA KALLKEALQA EVGLPVDRNI PLIGFIGRLE 420 EQKGSDILAE AIPQFIKENV QLVALGTGKK QMEKQLQELE ISYPDKARGV AKFNVPLAHM 480 IIAGADFILV PSRFEPCGLI QLQAMRYGSV PIVASTGGLV DTVKEGFTGF QMGAFSVECD 540 AVDPADVDAI AKTVKRALAV YGTPAFTEII KNCMAQDLSW KGPAKKWEEV LLSLGVPGSE 600 PGSDGEEIAP QAKENVATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-81 | 189 | 594 | 416 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-104 | 89 | 589 | 519 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 3.0e-128 | 97 | 590 | 503 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 2.0e-160 | 89 | 594 | 518 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-168 | 93 | 591 | 510 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABL96300.1 | 0 | 1 | 619 | 1 | 619 | granule-bound starch synthase [Glycine max] |
| GenBank | ABP35818.1 | 0 | 1 | 618 | 1 | 616 | granule-bound starch synthase Ib precursor [Vigna unguiculata] |
| GenBank | ACB30383.1 | 0 | 1 | 618 | 1 | 615 | granule bound starch synthase Ib precursor [Vigna radiata] |
| GenBank | ACB30385.1 | 0 | 1 | 619 | 1 | 614 | granule bound starch synthase Ib precursor [Lotus japonicus] |
| DDBJ | BAC76613.1 | 0 | 1 | 619 | 1 | 615 | granule-bound starch synthase Ib precursor [Phaseolus vulgaris] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 89 | 619 | 10 | 536 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3vue_A | 0 | 89 | 619 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 89 | 594 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 89 | 594 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 89 | 594 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 623 | 1 | 620 | 0 |
| HO825853 | 522 | 97 | 618 | 0 |
| HO629148 | 569 | 57 | 620 | 0 |
| HO778340 | 407 | 62 | 465 | 0 |
| HO778340 | 19 | 449 | 467 | 4.6 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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