| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g07421.1 |
| Family | CE8 |
| Protein Properties | Length: 245 Molecular Weight: 27236.2 Isoelectric Point: 5.625 |
| Chromosome | Chromosome/Scaffold: 16 Start: 6662993 End: 6668694 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 175 | 240 | 3e-24 |
| DSITSYLGRPWKQYSRTLFLKTNLDGLIDPNGWGEWIKDFALSTLYYGEYMNTRSGASTQNRVTWS | |||
| CE8 | 85 | 164 | 1.7e-35 |
| STISSVTFDVSGDGFWARDMTFENRAGPRGHQAVALRVSSDLSVFYKCSFKGYQDTLLQFYRDCHIYGTIDFIFGDASVV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 245 Download |
| MIYGHLNNIT ISKPLQETLS ESEGGLLASW SSGTSNADFT VAQDGSGTHK TITEAIDALD 60 AMDNNRPSRP IIYVKSGVYN EKGYSTISSV TFDVSGDGFW ARDMTFENRA GPRGHQAVAL 120 RVSSDLSVFY KCSFKGYQDT LLQFYRDCHI YGTIDFIFGD ASVVKPAYDF DSSKDSITSY 180 LGRPWKQYSR TLFLKTNLDG LIDPNGWGEW IKDFALSTLY YGEYMNTRSG ASTQNRVTWS 240 GFHV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 5.0e-69 | 37 | 244 | 283 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-74 | 26 | 244 | 294 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 6.0e-76 | 40 | 244 | 282 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-97 | 38 | 244 | 282 | + Pectinesterase. | ||
| PLN02916 | PLN02916 | 7.0e-115 | 5 | 244 | 316 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB82677.1 | 0 | 24 | 244 | 181 | 463 | pectinesterase-like protein [Arabidopsis thaliana] |
| EMBL | CAN75818.1 | 0 | 13 | 244 | 145 | 452 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191632.2 | 0 | 24 | 244 | 191 | 486 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002274478.1 | 0 | 13 | 244 | 145 | 452 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511680.1 | 0 | 24 | 244 | 144 | 439 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 32 | 244 | 2 | 286 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 37 | 244 | 3 | 282 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 0.0000001 | 34 | 184 | 3 | 210 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.0000001 | 34 | 184 | 3 | 210 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.0000001 | 34 | 184 | 3 | 210 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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