| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g08300.2 |
| Family | AA3 |
| Protein Properties | Length: 826 Molecular Weight: 91081.3 Isoelectric Point: 8.354 |
| Chromosome | Chromosome/Scaffold: 16 Start: 7566573 End: 7576908 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 298 | 818 | 0 |
| PKKTKASTLSSPSLVIKCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSNGLVATNDMSVLILAGSTVGGGSAINWSA SIRTPQHVCKEWCDRHELELFESMLYKEALDVVCEKMGVQSEIDDEGFNNAVLRRGCVEMGYPVCNIPRNATSDHYCGWCCLGCKDGRKKGTLETWLVDL VKSGNGAIIPSCEAIQVLHKKKKGRHRKIARGVAFAIEYKGKKDICVVESKVTIVACGALSTPALLKRSGLKNENIGRNLHLHPVAMAWGYFPDSPSPEL WPEKHKKSYEGGIMTAMSTVVAQFDKSGYGTVIQTPALHPGMFSILMPWTSGADIKDRMRKFSRTAHVFALARDQGSGTVNSPSCISYQLKDIDKENLKV GLEKVLRILAAAGAEEIGTHNNKGRRINVKQVSYHEFEKFVKEESSMSLTDISTPLCSAHQMGSCKMGTNPRESVVNQMGETWEVEGLYLADSSVFPTAL GVNPMVTVQAISYCTAQYVLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 826 Download |
| MNRKNMESNG ESHSSRSGSF REGFGLAPNE AKVHTLVELG SVDYTHTTTT TSLLQDGDDD 60 DVGEEREKEQ RKPLTNSLSP RQMKSLVALC DTLLPSINNN NVVWGSDDES VANFYKTSAS 120 MAGTPEHLGI LISEKLKHPS TWLLLLTLWL LSTWFGTFIL CGTLSLSTKF PFFHSYPELS 180 LLKRQKVMQS WSLSYLRPLR MFFRTIKLLT LLVFFTQLDE AEDNPSWKAI GYCGPDPEFK 240 SQLKNHFFTK QRGQEEKEDD GTEDVRGPLY KGLIRINNPR DIITDSLRRV GFSVSATPKK 300 TKASTLSSPS LVIKCDAVVV GSGSGGGVVA GVLANAGYKV LVLEKGSYSA RNNLSLLEGP 360 SMDQMYLSNG LVATNDMSVL ILAGSTVGGG SAINWSASIR TPQHVCKEWC DRHELELFES 420 MLYKEALDVV CEKMGVQSEI DDEGFNNAVL RRGCVEMGYP VCNIPRNATS DHYCGWCCLG 480 CKDGRKKGTL ETWLVDLVKS GNGAIIPSCE AIQVLHKKKK GRHRKIARGV AFAIEYKGKK 540 DICVVESKVT IVACGALSTP ALLKRSGLKN ENIGRNLHLH PVAMAWGYFP DSPSPELWPE 600 KHKKSYEGGI MTAMSTVVAQ FDKSGYGTVI QTPALHPGMF SILMPWTSGA DIKDRMRKFS 660 RTAHVFALAR DQGSGTVNSP SCISYQLKDI DKENLKVGLE KVLRILAAAG AEEIGTHNNK 720 GRRINVKQVS YHEFEKFVKE ESSMSLTDIS TPLCSAHQMG SCKMGTNPRE SVVNQMGETW 780 EVEGLYLADS SVFPTALGVN PMVTVQAISY CTAQYVLEVL RRKRK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-5 | 757 | 795 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 8.0e-21 | 683 | 808 | 126 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-37 | 333 | 818 | 540 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-69 | 362 | 582 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 29 | 825 | 3 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 83 | 824 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 29 | 825 | 3 | 788 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 83 | 824 | 1 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 127 | 824 | 7 | 709 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0000004 | 299 | 815 | 6 | 520 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1gpe_B | 0.0008 | 302 | 426 | 10 | 149 | A Chain A, Glucose Oxidase From Penicillium Amagasakiense |
| PDB | 1gpe_A | 0.0008 | 302 | 426 | 10 | 149 | A Chain A, Glucose Oxidase From Penicillium Amagasakiense |
| PDB | 1kdg_B | 0.001 | 316 | 585 | 9 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.001 | 316 | 585 | 9 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
