| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g09471.1 |
| Family | CE8 |
| Protein Properties | Length: 176 Molecular Weight: 19391 Isoelectric Point: 8.0511 |
| Chromosome | Chromosome/Scaffold: 16 Start: 9366667 End: 9369108 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 6 | 171 | 0 |
| EKTYGSTTFAVNSPYFLAKNITFQNTTPVPAPGVVGKQAVALRISADTTTFVGYKFLGAQDTIYDHLGKHFYKDCYIEGSVDFIFGNSLSLFEGCHVHAI AQIIGVVTAQGRSSMLEDTGFSVVNSKVTGSRALYLGRAWGPFSRVVFAYTYMENIIIPKGWYNWG | |||
| Full Sequence |
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| Protein Sequence Length: 176 Download |
| MVQCGEKTYG STTFAVNSPY FLAKNITFQN TTPVPAPGVV GKQAVALRIS ADTTTFVGYK 60 FLGAQDTIYD HLGKHFYKDC YIEGSVDFIF GNSLSLFEGC HVHAIAQIIG VVTAQGRSSM 120 LEDTGFSVVN SKVTGSRALY LGRAWGPFSR VVFAYTYMEN IIIPKGWYNW GDPNRE 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 3.0e-60 | 7 | 170 | 164 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 3.0e-60 | 5 | 176 | 172 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 2.0e-64 | 7 | 176 | 175 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 3.0e-65 | 8 | 176 | 177 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-119 | 8 | 176 | 169 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 5 | 176 | 154 | 330 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27989.1 | 0 | 8 | 176 | 96 | 264 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197474.1 | 0 | 8 | 176 | 166 | 334 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 8 | 176 | 164 | 332 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 8 | 176 | 166 | 334 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 8e-34 | 2 | 170 | 77 | 252 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-27 | 5 | 170 | 76 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 3e-16 | 5 | 147 | 106 | 271 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000000000005 | 8 | 167 | 85 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000000000005 | 8 | 167 | 85 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BQ610971 | 169 | 8 | 176 | 0 |
| FS089294 | 169 | 8 | 176 | 0 |
| CV270799 | 169 | 8 | 176 | 0 |
| DB896876 | 169 | 8 | 176 | 0 |
| EE105585 | 177 | 5 | 176 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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