| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g16415.1 |
| Family | AA3 |
| Protein Properties | Length: 829 Molecular Weight: 91407.6 Isoelectric Point: 7.5933 |
| Chromosome | Chromosome/Scaffold: 16 Start: 17400573 End: 17414090 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 301 | 821 | 0 |
| PKKTKASSLSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYSARNNLSLLEGPSMDQMYLSNGLVATKDMSVLILAGSTVGGGSAINWSA SIRTPQHVCKEWCDGHELELFESKLYKEALDVVCEKMGVQSEIDDEGFNNAVLRRGCLEMGYPVCDIPRNASSDHYCGWCCMGCKDGRKKGTLETWLVDL VKSGNGAIIPSCEAIQVLHKKKKGRDRKIARGVAFAIEYKGKRDICVVESKVTVVACGALSTPALLKRSGLKNENIGRNLHLHPVAMAWGYFPDSLSPEL WPEKHKKSYEGGIMTAMSTVVAQFDKSGYGAVIQTPALHPGMFSILMPWTSGKDIKDRMRKFSRTAHVFALARDQGSGTVNSPSHISYQLKDVDKENLKI GLEKVLRILAAAGAEEIGTHNNKGRSINVKQVSYHEFEKFVKEESSMSLTDISTPLCSAHQMGSCKMGTNPRESVVNQMGETWEVEGLYLADTSVFPTAL GVNPMVTVQAISYCTAQYVLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 829 Download |
| MNRKSMESNG ESHSRSGSFR VGFGLGPNEA KVHTVVELGS VDYTHTTTTC LLLDDDDDVG 60 EEREKEQKKP LTNSLSPRQM KSLVALCDTL LPSINNNSNN VCGSDDDESV ANFYKTSASM 120 AGTPEHLGIL ISEKLRHPST WLLLLSLWLL STWFGTFILC GMLSLSTKFP FFHSYPELSL 180 LKQQKVMQSW SLSYLRPLRM LFRTIKLLTL LVFFTQLDEA EDNPSWKAIN YCGPDPEFKS 240 QLKNHFFTKE RGQEEKEDED YDDGTEDVRG PLYKGLIYIN YPRDIITDSL RRVGFSVSAT 300 PKKTKASSLS SPSLVIQCDA VVVGSGSGGG VVAGVLANAG YKVLVLEKGS YSARNNLSLL 360 EGPSMDQMYL SNGLVATKDM SVLILAGSTV GGGSAINWSA SIRTPQHVCK EWCDGHELEL 420 FESKLYKEAL DVVCEKMGVQ SEIDDEGFNN AVLRRGCLEM GYPVCDIPRN ASSDHYCGWC 480 CMGCKDGRKK GTLETWLVDL VKSGNGAIIP SCEAIQVLHK KKKGRDRKIA RGVAFAIEYK 540 GKRDICVVES KVTVVACGAL STPALLKRSG LKNENIGRNL HLHPVAMAWG YFPDSLSPEL 600 WPEKHKKSYE GGIMTAMSTV VAQFDKSGYG AVIQTPALHP GMFSILMPWT SGKDIKDRMR 660 KFSRTAHVFA LARDQGSGTV NSPSHISYQL KDVDKENLKI GLEKVLRILA AAGAEEIGTH 720 NNKGRSINVK QVSYHEFEKF VKEESSMSLT DISTPLCSAH QMGSCKMGTN PRESVVNQMG 780 ETWEVEGLYL ADTSVFPTAL GVNPMVTVQA ISYCTAQYVL EVLRRKRK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 5.0e-5 | 760 | 798 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 5.0e-21 | 685 | 811 | 127 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-37 | 336 | 821 | 551 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-70 | 365 | 585 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 28 | 828 | 3 | 649 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 80 | 827 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 28 | 828 | 3 | 788 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 80 | 827 | 1 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 126 | 827 | 7 | 709 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1naa_B | 0.00009 | 319 | 588 | 4 | 283 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.00009 | 319 | 588 | 4 | 283 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1kdg_B | 0.0001 | 319 | 588 | 9 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.0001 | 319 | 588 | 9 | 288 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 3t37_A | 0.0002 | 302 | 818 | 6 | 520 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
