| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma16g28970.1 |
| Family | GH18 |
| Protein Properties | Length: 298 Molecular Weight: 31768.6 Isoelectric Point: 4.8836 |
| Chromosome | Chromosome/Scaffold: 16 Start: 32890367 End: 32891970 |
| Description | chitinase A |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 28 | 249 | 2e-31 |
| IAIYWGQNGGEGTLAEACNTRNYQYVNIAFLSTFGNGQTPQLNLAGHCDPNNNGCTGLSSDIKTCQDLGIKVLLSLGGGAGSYSLSSADDATQLANYLWQ NFLGGQTGSGPLGNVILDGIDFDIESGGSDHYDDLARALNSFSSQRKVYLSAAPQCIIPDAHLDRAIQTGLFDYVWVQFYNNPSCQYSSGNTNNLINSWN QWITVPASQIFMGLPASEAAAP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 298 Download |
| MKTLNKASLI LFPLLFLSLF KHSHAAGIAI YWGQNGGEGT LAEACNTRNY QYVNIAFLST 60 FGNGQTPQLN LAGHCDPNNN GCTGLSSDIK TCQDLGIKVL LSLGGGAGSY SLSSADDATQ 120 LANYLWQNFL GGQTGSGPLG NVILDGIDFD IESGGSDHYD DLARALNSFS SQRKVYLSAA 180 PQCIIPDAHL DRAIQTGLFD YVWVQFYNNP SCQYSSGNTN NLINSWNQWI TVPASQIFMG 240 LPASEAAAPS GGFVPADVLT SQVLPVIKQS SKYGGVMLWN RFNDVQNGYS NAIIGSV* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd02871 | GH18_chitinase_D-like | 0.005 | 32 | 279 | 299 | + GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. | ||
| cd06545 | GH18_3CO4_chitinase | 0.003 | 144 | 293 | 169 | + The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas. | ||
| COG3469 | COG3469 | 0.0006 | 145 | 280 | 169 | + Chitinase [Carbohydrate transport and metabolism] | ||
| pfam00704 | Glyco_hydro_18 | 8.0e-27 | 28 | 284 | 353 | + Glycosyl hydrolases family 18. | ||
| cd02877 | GH18_hevamine_XipI_class_III | 2.0e-124 | 26 | 295 | 281 | + This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU21507.1 | 0 | 1 | 297 | 1 | 297 | unknown [Glycine max] |
| GenBank | ACU24254.1 | 0 | 1 | 297 | 1 | 297 | unknown [Glycine max] |
| DDBJ | BAA08708.1 | 0 | 1 | 297 | 1 | 297 | chitinase [Psophocarpus tetragonolobus] |
| DDBJ | BAA77675.1 | 0 | 1 | 297 | 1 | 298 | Chitinase III-A [Glycine max] |
| DDBJ | BAA77676.1 | 0 | 1 | 297 | 1 | 297 | acidic chitinase [Glycine max] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gsj_A | 0 | 27 | 297 | 2 | 271 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 2hvm_A | 0 | 27 | 297 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1llo_A | 0 | 27 | 297 | 2 | 273 | A Chain A, Cdna Cloning And 1.75a Crystal Structure Determination Of Ppl2, A Novel Chimerolectin From Parkia Platycephala Seeds Exhibiting Endochitinolytic Activity |
| PDB | 1hvq_A | 0 | 27 | 297 | 2 | 273 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
| PDB | 1kr0_A | 0 | 27 | 297 | 2 | 273 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
