y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma16g34360.2 |
Family | GH14 |
Protein Properties | Length: 571 Molecular Weight: 62946.4 Isoelectric Point: 6.0677 |
Chromosome | Chromosome/Scaffold: 16 Start: 37036565 End: 37040950 |
Description | beta-amylase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 107 | 527 | 0 |
FVMMPLDSVKTGNAVNRKKAMNAAMAALKSAGVEGVMMDVWWGLVEREKPGEYNWGGYVELMEMAKKHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEE IDNDPDLAYTDQWGRRNYEYISLGCDTSPVLKGRTPVQCYADFMRAFRDTFKHLLGDTIVEIQVGMGPAGELRYPSYPEQNGTWNFPGIGGFQCYDKYML SSLKAAAEAEGKPEWGSTGPTDAGHYNNWPEDTQFFRKEGGGWDGPYGEFFLTWYSQMLLDHGDRILSSATSIFDNTGVKISVKVAGIHWHYGSRSHAPE LTAGYYNTRFRDGYIPIAQMLARHGAIFNFTCIEMRDHEQPQDALCAPEKLVKQVALATQKAQVPLAGENALPRYDEYAHEQIIRASQLDVDGDSGGREM CAFTYLRMNPHLFEPNNWRKF |
Full Sequence |
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Protein Sequence Length: 571 Download |
MALNMTHQIG TLAAATVPVP NSSAGESTAA MSAATLWKPP AVSLKCKVTR TEGGAEGLSP 60 PLSPCRSPVL RADLSAACQA FTAEVAAEEY IAGGKEKGEG KEGVPLFVMM PLDSVKTGNA 120 VNRKKAMNAA MAALKSAGVE GVMMDVWWGL VEREKPGEYN WGGYVELMEM AKKHGLKVQA 180 VMSFHQCGGN VGDSCTIPLP KWVVEEIDND PDLAYTDQWG RRNYEYISLG CDTSPVLKGR 240 TPVQCYADFM RAFRDTFKHL LGDTIVEIQV GMGPAGELRY PSYPEQNGTW NFPGIGGFQC 300 YDKYMLSSLK AAAEAEGKPE WGSTGPTDAG HYNNWPEDTQ FFRKEGGGWD GPYGEFFLTW 360 YSQMLLDHGD RILSSATSIF DNTGVKISVK VAGIHWHYGS RSHAPELTAG YYNTRFRDGY 420 IPIAQMLARH GAIFNFTCIE MRDHEQPQDA LCAPEKLVKQ VALATQKAQV PLAGENALPR 480 YDEYAHEQII RASQLDVDGD SGGREMCAFT YLRMNPHLFE PNNWRKFVGF VKKMKEGKSA 540 HKCWEEVERE AEHFVHVTQP LVQEAAVLMH * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 7.0e-132 | 104 | 534 | 441 | + beta-amylase | ||
PLN02905 | PLN02905 | 2.0e-139 | 104 | 534 | 435 | + beta-amylase | ||
PLN02801 | PLN02801 | 8.0e-174 | 104 | 534 | 435 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 1 | 570 | 581 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 60 | 537 | 488 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY89374.1 | 0 | 1 | 570 | 1 | 576 | beta-amylase 1 [Nicotiana langsdorffii x Nicotiana sanderae] |
EMBL | CAN71375.1 | 0 | 3 | 570 | 1 | 570 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285569.1 | 0 | 2 | 570 | 3 | 573 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311706.1 | 0 | 3 | 567 | 1 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518196.1 | 0 | 1 | 570 | 1 | 574 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 104 | 534 | 6 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1wdp_A | 0 | 104 | 534 | 12 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6c_A | 0 | 104 | 534 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 104 | 534 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 104 | 534 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779314 | 410 | 162 | 571 | 0 |
HO798206 | 348 | 224 | 571 | 0 |
HO826564 | 409 | 160 | 568 | 0 |
DT555349 | 320 | 191 | 510 | 0 |
DY279190 | 349 | 223 | 570 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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