y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g03170.1 |
Family | CE8 |
Protein Properties | Length: 580 Molecular Weight: 63996.9 Isoelectric Point: 6.6035 |
Chromosome | Chromosome/Scaffold: 17 Start: 2130674 End: 2135439 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 255 | 547 | 0 |
DVVVAQDGSGQVKTIHEALKLVPKKNKKPFVIYVKAGVYQEYIMINKHLTHVTMIGDGPTKTRITGSKNYVDGIKTYNTATFGVNAANFMAMNIGFENTA GAEKHQAVALRVTADKAVFYNCNMDGFQDTLYTQSQRQFYRDCTVTGTIDFVFGDAVAVFQNCKFIVRKPMENQQCMVTAGGRTKIDSPSALVFQSCIFT GEPDVFALSPKIAYLGRPWRVYAKVVIMDSQIDDIFVPEGYMPWMGSAFKDTSTYYEFNNRGFGANTQGRITWPGFKVITPIEATDYYPGKFF |
Full Sequence |
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Protein Sequence Length: 580 Download |
MKNGLDTTHE KKKRKLAILS VSSLLLVAMV VAAAVGIREG ADVVEEGGDS IVKSQRNVQV 60 ICESAEYKET CHKSLAKASE TSDLKELIIT AFNATAEEIA KQIKNSTLYH ELATDDMNKQ 120 AMDICKEVLG YAVDDMHQSV RKLEEFELNK LNDYAYDLKV WIAGTLAHQQ TCLDGFENTT 180 NEAGKTMARV LNTSLELSNN ALDIVNGVSN LFKGLNLSSF SNNNNRKLLS EVDGFPTWVS 240 EGQRRLLQAA DAKADVVVAQ DGSGQVKTIH EALKLVPKKN KKPFVIYVKA GVYQEYIMIN 300 KHLTHVTMIG DGPTKTRITG SKNYVDGIKT YNTATFGVNA ANFMAMNIGF ENTAGAEKHQ 360 AVALRVTADK AVFYNCNMDG FQDTLYTQSQ RQFYRDCTVT GTIDFVFGDA VAVFQNCKFI 420 VRKPMENQQC MVTAGGRTKI DSPSALVFQS CIFTGEPDVF ALSPKIAYLG RPWRVYAKVV 480 IMDSQIDDIF VPEGYMPWMG SAFKDTSTYY EFNNRGFGAN TQGRITWPGF KVITPIEATD 540 YYPGKFFEIA NSTERDSWIV GSGVPYSLGP IIALPLPTA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 7.0e-125 | 45 | 569 | 531 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 5.0e-140 | 49 | 569 | 544 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 2.0e-157 | 51 | 566 | 525 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 2.0e-164 | 46 | 569 | 528 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-165 | 262 | 547 | 288 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAB65290.2 | 0 | 9 | 573 | 10 | 549 | pectin methyl-esterase PER [Medicago truncatula] |
EMBL | CAB65291.1 | 0 | 46 | 571 | 39 | 565 | pectin methyl-esterase PEF1 [Medicago truncatula] |
Swiss-Prot | Q42920 | 0 | 122 | 571 | 1 | 447 | PME_MEDSA RecName: Full=Pectinesterase/pectinesterase inhibitor; Includes: RecName: Full=Pectinesterase inhibitor; AltName: Full=Pectin methylesterase inhibitor; Includes: RecName: Full=Pectinesterase; Short=PE; AltName: Full=Pectin methylesterase; AltName: Full=P65; Flags: Precursor |
RefSeq | XP_002314364.1 | 0 | 51 | 573 | 53 | 571 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516960.1 | 0 | 42 | 569 | 43 | 575 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 255 | 569 | 8 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 254 | 569 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-25 | 252 | 523 | 29 | 332 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 2e-21 | 267 | 473 | 19 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-21 | 267 | 473 | 19 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |