Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g11850.1 |
Family | GT47 |
Protein Properties | Length: 474 Molecular Weight: 54901.5 Isoelectric Point: 10.0021 |
Chromosome | Chromosome/Scaffold: 17 Start: 8897844 End: 8900998 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 136 | 422 | 0 |
KRLKVWAYKEGEQPLVHDGPVNNKYSIEGQFIDEMDMASMSPFKATHPEQAHLFLLPYSVSKVIRYVYKPRRSRSDYDPDRLQRLVADYINILANRYPYW NRSKGADHFLVSCHDWGPRISDANPELFKYFIRALCNANTSEGFQPNRDVSIPEVYLPSGKLGPPNMGQHPNNRTILAFFAGGAHGKIRKKLLKRWKNKD KEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFIDVLNWRKFSMEIAVERMPEIKTILQSV |
Full Sequence |
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Protein Sequence Length: 474 Download |
MKVFKSRLFP LVFLVFFLNV FLVFFTPSYD YHMIHLHSDS AFTLSSRIKA NHVLPSTSAN 60 DSYSNEVDEV IKFGHVMKNV TSLKRIEEGL ARARSFIQEA IRSKINTTAT KDSFVPKDSI 120 YWNPHAFHQS HVEMMKRLKV WAYKEGEQPL VHDGPVNNKY SIEGQFIDEM DMASMSPFKA 180 THPEQAHLFL LPYSVSKVIR YVYKPRRSRS DYDPDRLQRL VADYINILAN RYPYWNRSKG 240 ADHFLVSCHD WGPRISDANP ELFKYFIRAL CNANTSEGFQ PNRDVSIPEV YLPSGKLGPP 300 NMGQHPNNRT ILAFFAGGAH GKIRKKLLKR WKNKDKEVQV HEYLPKGQDY TKLMGLSKFC 360 LCPSGHEVAS PRVVEAIYAG CVPVIICDNY SLPFIDVLNW RKFSMEIAVE RMPEIKTILQ 420 SVSKDKYLEL YSNVRRVRRH FVINRPAKPF DLIHMILHSL WLRRLNFKLT ASH* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-56 | 134 | 422 | 309 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA18105.1 | 0 | 78 | 471 | 27 | 423 | exostosin family protein [Capsella rubella] |
GenBank | ABP03872.1 | 0 | 1 | 469 | 20 | 465 | Exostosin-like [Medicago truncatula] |
GenBank | ABP03873.1 | 0 | 48 | 472 | 207 | 616 | Exostosin-like [Medicago truncatula] |
EMBL | CBI25537.1 | 0 | 40 | 469 | 38 | 475 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263848.1 | 0 | 77 | 469 | 1 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |