| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma17g15060.2 |
| Family | GT8 |
| Protein Properties | Length: 477 Molecular Weight: 54177.7 Isoelectric Point: 9.1659 |
| Chromosome | Chromosome/Scaffold: 17 Start: 11788516 End: 11796794 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 55 | 274 | 2.5e-30 |
| DYEFYIAIRVLLKSLATLDAQADLVVIASLDVPPRWIRALEKEDGAKVVRVENLDNPYKHQDNFDKRFKLSLNKLYAWSLVDYDRVVMLDADNLFLQNTD ELFQCGQFCAVFINPCVFHTGLFVLKPSMAVFKDMVHELRNGRENPDGADQGFIASYFPELLDKPMFHPPPNATKLDGTYRLPLGYQMDASYYYLKLRWS IPCGPNSVITFPGAPWLKPW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MAWANKRGDS KNAGFMRTLV VVLLVLLSGF WCVSGVKEGK RNAYATMMYV GTPRDYEFYI 60 AIRVLLKSLA TLDAQADLVV IASLDVPPRW IRALEKEDGA KVVRVENLDN PYKHQDNFDK 120 RFKLSLNKLY AWSLVDYDRV VMLDADNLFL QNTDELFQCG QFCAVFINPC VFHTGLFVLK 180 PSMAVFKDMV HELRNGRENP DGADQGFIAS YFPELLDKPM FHPPPNATKL DGTYRLPLGY 240 QMDASYYYLK LRWSIPCGPN SVITFPGAPW LKPWYWWSWP VLPLGLQWHE KRRQTLGYGA 300 EMAVILIQSA IYLGIIAMKR FARPSLSKLC YRRSDKSINL VQNILKFVAL WSILAAYTTP 360 FFIIPPTVHP LLGWPLYLLG VFALCSITVN AFLLPMLPVL MPWLGIAGAL IVMAFPWYSD 420 GVVRALCVFG YAFCAAPFVW ASMTRIMAGL HQSLEREAFL PRLGESSPPS WFNKLY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00176 | PLN00176 | 3.0e-6 | 65 | 230 | 203 | + galactinol synthase | ||
| COG5597 | COG5597 | 4.0e-7 | 36 | 218 | 198 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| cd06914 | GT8_GNT1 | 5.0e-9 | 44 | 274 | 248 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| pfam01501 | Glyco_transf_8 | 5.0e-11 | 55 | 278 | 261 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 1.0e-65 | 42 | 294 | 263 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAH67416.1 | 0 | 40 | 476 | 40 | 474 | OSIGBa0143N19.10 [Oryza sativa (indica cultivar-group)] |
| EMBL | CAN77033.1 | 0 | 47 | 475 | 1 | 422 | hypothetical protein [Vitis vinifera] |
| GenBank | EEC77769.1 | 0 | 40 | 476 | 40 | 474 | hypothetical protein OsI_16920 [Oryza sativa Indica Group] |
| RefSeq | NP_565817.2 | 0 | 41 | 476 | 62 | 497 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
| RefSeq | XP_002269578.1 | 0 | 19 | 468 | 11 | 465 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2t_A | 0.0000000000001 | 34 | 212 | 9 | 193 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
| PDB | 3u2x_B | 0.000000000002 | 64 | 212 | 22 | 172 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
| PDB | 3u2x_A | 0.000000000002 | 64 | 212 | 22 | 172 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
| PDB | 3u2v_B | 0.000000000002 | 64 | 212 | 22 | 172 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
| PDB | 3u2v_A | 0.000000000002 | 64 | 212 | 22 | 172 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
