y
Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g16020.1 |
Family | GH14 |
Protein Properties | Length: 541 Molecular Weight: 60538.6 Isoelectric Point: 7.8796 |
Chromosome | Chromosome/Scaffold: 17 Start: 12701071 End: 12704560 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 81 | 495 | 0 |
YVMLPLDTVTMGGSLNKPRAMNASLMALKSAGVEGVMVDAWWGLVEKEGPLKYNWEPYAELVQMLQMHGLKLQVVMSFHQCGGNVGDNCSIPLPPWVLEE ISKNPELVYTDRSGRRNPEYISLGCDSVPVLNGRTPLQVYSDYMRSFRDKFRDYLGSVIVEIQLGMGPCGELRYPSYPETNGTWRFPGIGEFQCYDKYMK ASLAAAAEDIGKKEWGGGGPHDSGQYNQFPEDTGFFKREGTWNTEYGQFFLEWYSGKLLEHGERILVSAKGIFETTGVKLSGKVAGIHWHYRARSHAAEL TAGYYNTRNNDGYLPIARMLAKHGVVFNFTCMEMKDREQPDFANCSPEGLVHQVKMATTTARAELAGENALERYDADAYAQVLSTSKSESGSGLAAFTYL RMNKRLFEADNWRHL |
Full Sequence |
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Protein Sequence Length: 541 Download |
MALTLRSSTS FINQKETKVL KTSDNAPAIV SFSKFKPSSS LFRLRAKNSM QEAHHTREKW 60 EKVLAPSVAH SHNDSKRVPV YVMLPLDTVT MGGSLNKPRA MNASLMALKS AGVEGVMVDA 120 WWGLVEKEGP LKYNWEPYAE LVQMLQMHGL KLQVVMSFHQ CGGNVGDNCS IPLPPWVLEE 180 ISKNPELVYT DRSGRRNPEY ISLGCDSVPV LNGRTPLQVY SDYMRSFRDK FRDYLGSVIV 240 EIQLGMGPCG ELRYPSYPET NGTWRFPGIG EFQCYDKYMK ASLAAAAEDI GKKEWGGGGP 300 HDSGQYNQFP EDTGFFKREG TWNTEYGQFF LEWYSGKLLE HGERILVSAK GIFETTGVKL 360 SGKVAGIHWH YRARSHAAEL TAGYYNTRNN DGYLPIARML AKHGVVFNFT CMEMKDREQP 420 DFANCSPEGL VHQVKMATTT ARAELAGENA LERYDADAYA QVLSTSKSES GSGLAAFTYL 480 RMNKRLFEAD NWRHLVDFVR SMSEGGRRER LPAADSHGSD LYVGHIKATQ EKHTQEAALV 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 9.0e-144 | 42 | 503 | 474 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 2.0e-167 | 81 | 498 | 429 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 540 | 551 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 76 | 510 | 441 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 78 | 502 | 433 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI39244.1 | 0 | 1 | 540 | 1 | 540 | beta-amylase [Glycine max] |
EMBL | CAN62440.1 | 0 | 1 | 540 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 540 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 540 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 540 | 1 | 548 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
PDB | 1q6c_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1ukp_D | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 78 | 502 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794833 | 426 | 116 | 541 | 0 |
HO781538 | 395 | 42 | 425 | 0 |
BU103692 | 541 | 1 | 532 | 0 |
HO825836 | 388 | 152 | 538 | 0 |
FE677690 | 284 | 250 | 533 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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