Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g24410.1 |
Family | GH3 |
Protein Properties | Length: 629 Molecular Weight: 69240 Isoelectric Point: 9.5099 |
Chromosome | Chromosome/Scaffold: 17 Start: 24767879 End: 24773701 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 105 | 340 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPKLVRKIGEATALEVRATGIQYVFAPCIAVCRDPRWGRCYESYSEDHKVVQAMTEIIPGLQ GDIPPNSRKGVPFVAGKKKVAACAKHYVGDGGTTKGINENNTVISRHGLLSIHVPAYYNSIIKGVSTIMISYSSWNGQKMHANHNLITDFLKNTLRFRGF VISDWQGIDRITTPSHANYTYSIYAGITAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 629 Download |
MAKIPIFSVG IMLLHCWAAM TGAEYLKYKD PKQPLNNRIK DLMNRMTLEE KIGQMTQIDR 60 KVASAEVMNK YYIGSVLSGG GSVPRAQASA KDWIHMVNDF QKGALSTRLG IPMIYGIDAV 120 HGHNNVYKAT IFPHNVGLGA TRDPKLVRKI GEATALEVRA TGIQYVFAPC IAVCRDPRWG 180 RCYESYSEDH KVVQAMTEII PGLQGDIPPN SRKGVPFVAG KKKVAACAKH YVGDGGTTKG 240 INENNTVISR HGLLSIHVPA YYNSIIKGVS TIMISYSSWN GQKMHANHNL ITDFLKNTLR 300 FRGFVISDWQ GIDRITTPSH ANYTYSIYAG ITAGIDMIMV PYNYTEFIDG LTSQVKNNLI 360 PMSRIDDAVK RILRVKFIMG LFENPLADYS LVKQLGSKKH RKLARKAVRK SLVLLKNGED 420 ADQPLLPLPK KASKILVAGS HADNLGYQCG GWTIEWQGLE TNNLTKGTTI LSAIKNTVDK 480 DTEVVYKENP DLDYVKSNGF SYAIVVVGEK PYAETNGDSM NLTISEPGPD TIMNVCGGVK 540 CVAVIISGRP VVIQPYLHLI DALVAAWLPG SEGHGVTDVL FGDYGFRGKL PRTWFKTVDQ 600 LPMNVGDSHY DPLFPFGFGL ETKPPKAN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-31 | 34 | 612 | 633 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-51 | 412 | 620 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-72 | 1 | 620 | 697 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 3.0e-79 | 46 | 454 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-86 | 47 | 375 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 1 | 626 | 1 | 624 | unknown [Populus trichocarpa] |
EMBL | CBI39076.1 | 0 | 24 | 627 | 24 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 24 | 627 | 24 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 28 | 626 | 3 | 601 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 13 | 626 | 3 | 611 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iex_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iew_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1iev_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1ieq_A | 0 | 24 | 626 | 1 | 603 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |